RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 KCTD17Q8N5Z5 321 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 OR2I1PQ8NGU4 316 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 SPATA18Q8TC71 538 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 LLPHQ9BRT6 129 aaKnown RBP17.9■□□□□ 0.46
CHMP3-203ENST00000409225 ZHX3Q9H4I2 956 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 PARVGQ9HBI0 331 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.9■□□□□ 0.46
CHMP3-203ENST00000409225 AGO2Q9UKV8 859 aaKnown RBP17.9■□□□□ 0.46
CHMP3-203ENST00000409225 ANAPC1Q9H1A4 1944 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 TCRBV21S2A2A0A5A6 115 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 SCAMP3O14828 347 aaKnown RBP17.89■□□□□ 0.45
CHMP3-203ENST00000409225 TRAK2O60296 914 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 HUS1O60921 280 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 SCP2P22307 547 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 MYL7Q01449 175 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 KDSRQ06136 332 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 DUOXA1Q1HG43 343 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 ZNF423Q2M1K9 1284 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 SPDYCQ5MJ68 293 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 EOGTQ5NDL2 527 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 PEAR1Q5VY43 1037 aaPredicted RBP17.89■□□□□ 0.45
CHMP3-203ENST00000409225 OSTM1Q86WC4 334 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 MINDY1Q8N5J2 469 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 CEP76Q8TAP6 659 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 PNKPQ96T60 521 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 PKMYT1Q99640 499 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 AGAP1Q9UPQ3 857 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 HELZP42694 1942 aaKnown RBP17.89■□□□□ 0.45
CHMP3-203ENST00000409225 FREM2Q5SZK8 3169 aa17.89■□□□□ 0.45
CHMP3-203ENST00000409225 VWA3AA6NCI4 1184 aa17.88■□□□□ 0.45
CHMP3-203ENST00000409225 HCRTO43612 131 aa17.88■□□□□ 0.45
CHMP3-203ENST00000409225 KAT7O95251 611 aa17.88■□□□□ 0.45
CHMP3-203ENST00000409225 APODP05090 189 aa17.88■□□□□ 0.45
CHMP3-203ENST00000409225 KRT18P05783 430 aaKnown RBP17.88■□□□□ 0.45
CHMP3-203ENST00000409225 SERPINF2P08697 491 aa17.88■□□□□ 0.45
CHMP3-203ENST00000409225 CHRM1P11229 460 aaPredicted RBP17.88■□□□□ 0.45
CHMP3-203ENST00000409225 POLR2BP30876 1174 aaKnown RBP17.88■□□□□ 0.45
CHMP3-203ENST00000409225 HOXD12P35452 270 aa17.88■□□□□ 0.45
CHMP3-203ENST00000409225 PNPLA4P41247 253 aa17.88■□□□□ 0.45
CHMP3-203ENST00000409225 PDE6CP51160 858 aa17.88■□□□□ 0.45
CHMP3-203ENST00000409225 HMGN5P82970 282 aaKnown RBP17.88■□□□□ 0.45
CHMP3-203ENST00000409225 ATP2C1P98194 919 aaPredicted RBP17.88■□□□□ 0.45
CHMP3-203ENST00000409225 RPL6Q02878 288 aaKnown RBP17.88■□□□□ 0.45
CHMP3-203ENST00000409225 RESTQ13127 1097 aa17.88■□□□□ 0.45
CHMP3-203ENST00000409225 DHCR24Q15392 516 aa17.88■□□□□ 0.45
CHMP3-203ENST00000409225 HSF5Q4G112 596 aaPredicted RBP17.88■□□□□ 0.45
CHMP3-203ENST00000409225 C12orf40Q86WS4 652 aa17.88■□□□□ 0.45
CHMP3-203ENST00000409225 LIMCH1Q9UPQ0 1083 aa17.88■□□□□ 0.45
CHMP3-203ENST00000409225 SMG1Q96Q15 3661 aaKnown RBP17.87■□□□□ 0.45
CHMP3-203ENST00000409225 AP5Z1O43299 807 aa17.87■□□□□ 0.45
CHMP3-203ENST00000409225 ADAM23O75077 832 aa17.87■□□□□ 0.45
CHMP3-203ENST00000409225 ITGB3P05106 788 aa17.87■□□□□ 0.45
CHMP3-203ENST00000409225 CD59P13987 128 aa17.87■□□□□ 0.45
CHMP3-203ENST00000409225 KIR2DL1P43626 348 aaPredicted RBP17.87■□□□□ 0.45
CHMP3-203ENST00000409225 ZNF131P52739 623 aa17.87■□□□□ 0.45
CHMP3-203ENST00000409225 TFAMQ00059 246 aaKnown RBP17.87■□□□□ 0.45
CHMP3-203ENST00000409225 GTF2BQ00403 316 aa17.87■□□□□ 0.45
CHMP3-203ENST00000409225 CFAP221Q4G0U5 840 aa17.87■□□□□ 0.45
CHMP3-203ENST00000409225 SLFN12LQ6IEE8 588 aa17.87■□□□□ 0.45
CHMP3-203ENST00000409225 CRELD2Q6UXH1 353 aaPredicted RBP17.87■□□□□ 0.45
CHMP3-203ENST00000409225 ADGRG2Q8IZP9 1017 aa17.87■□□□□ 0.45
CHMP3-203ENST00000409225 TMEM86AQ8N2M4 240 aa17.87■□□□□ 0.45
CHMP3-203ENST00000409225 CAMK1GQ96NX5 476 aa17.87■□□□□ 0.45
CHMP3-203ENST00000409225 FIZ1Q96SL8 496 aa17.87■□□□□ 0.45
CHMP3-203ENST00000409225 IKZF4Q9H2S9 585 aa17.87■□□□□ 0.45
CHMP3-203ENST00000409225 CAPN10Q9HC96 672 aa17.87■□□□□ 0.45
CHMP3-203ENST00000409225 PLXND1Q9Y4D7 1925 aa17.86■□□□□ 0.45
CHMP3-203ENST00000409225 TBCAO75347 108 aaKnown RBP17.86■□□□□ 0.45
CHMP3-203ENST00000409225 IL18RAPO95256 599 aa17.86■□□□□ 0.45
CHMP3-203ENST00000409225 SCARA3Q6AZY7 606 aa17.86■□□□□ 0.45
CHMP3-203ENST00000409225 POMGNT1Q8WZA1 660 aa17.86■□□□□ 0.45
CHMP3-203ENST00000409225 FUBP3Q96I24 572 aaKnown RBP eCLIP17.86■□□□□ 0.45
CHMP3-203ENST00000409225 FAM84AQ96KN4 292 aa17.86■□□□□ 0.45
CHMP3-203ENST00000409225 ARHGEF4Q9NR80 690 aa17.86■□□□□ 0.45
CHMP3-203ENST00000409225 SMPD4Q9NXE4 827 aa17.86■□□□□ 0.45
CHMP3-203ENST00000409225 TRPM5Q9NZQ8 1165 aa17.86■□□□□ 0.45
CHMP3-203ENST00000409225 CPQQ9Y646 472 aa17.86■□□□□ 0.45
CHMP3-203ENST00000409225 STYXL1Q9Y6J8 313 aa17.86■□□□□ 0.45
CHMP3-203ENST00000409225 PCDH15Q96QU1 1955 aa17.86■□□□□ 0.45
CHMP3-203ENST00000409225 GCN1Q92616 2671 aaKnown RBP17.85■□□□□ 0.45
CHMP3-203ENST00000409225 ARHGAP33O14559 1287 aa17.85■□□□□ 0.45
CHMP3-203ENST00000409225 SH3BP5O60239 455 aa17.85■□□□□ 0.45
CHMP3-203ENST00000409225 ZIC2O95409 532 aaPredicted RBP17.85■□□□□ 0.45
CHMP3-203ENST00000409225 EIF2DP41214 584 aaKnown RBP17.85■□□□□ 0.45
CHMP3-203ENST00000409225 GRIA2P42262 883 aa17.85■□□□□ 0.45
CHMP3-203ENST00000409225 WNT7BP56706 349 aa17.85■□□□□ 0.45
CHMP3-203ENST00000409225 USP46P62068 366 aa17.85■□□□□ 0.45
CHMP3-203ENST00000409225 HNRNPDQ14103 355 aaKnown RBP17.85■□□□□ 0.45
CHMP3-203ENST00000409225 MCM6Q14566 821 aa17.85■□□□□ 0.45
CHMP3-203ENST00000409225 TRIP6Q15654 476 aaKnown RBP17.85■□□□□ 0.45
CHMP3-203ENST00000409225 RHBDF2Q6PJF5 856 aa17.85■□□□□ 0.45
CHMP3-203ENST00000409225 RABEPKQ7Z6M1 372 aa17.85■□□□□ 0.45
CHMP3-203ENST00000409225 NT5DC4Q86YG4 428 aa17.85■□□□□ 0.45
CHMP3-203ENST00000409225 ADGRF2Q8IZF7 708 aa17.85■□□□□ 0.45
CHMP3-203ENST00000409225 PNPLA1Q8N8W4 532 aa17.85■□□□□ 0.45
CHMP3-203ENST00000409225 C1orf127Q8N9H9 656 aa17.85■□□□□ 0.45
CHMP3-203ENST00000409225 COL26A1Q96A83 441 aa17.85■□□□□ 0.45
CHMP3-203ENST00000409225 CCDC86Q9H6F5 360 aaKnown RBP17.85■□□□□ 0.45
CHMP3-203ENST00000409225 PCDHB9Q9Y5E1 797 aa17.85■□□□□ 0.45
CHMP3-203ENST00000409225 SNX9Q9Y5X1 595 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms