RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 PPP6R3Q5H9R7 873 aaPredicted RBP9.43□□□□□ -0.9
PSEN1-205ENST00000406768 TPTE2Q6XPS3 522 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 KBTBD2Q8IY47 623 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 NEDD1Q8NHV4 660 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 GABPB2Q8TAK5 448 aaPredicted RBP9.43□□□□□ -0.9
PSEN1-205ENST00000406768 MCRS1Q96EZ8 462 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 POP1Q99575 1024 aaKnown RBP9.43□□□□□ -0.9
PSEN1-205ENST00000406768 MIPEPQ99797 713 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 TRIM15Q9C019 465 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 EPB41L1Q9H4G0 881 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 USP29Q9HBJ7 922 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 SORCS3Q9UPU3 1222 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 MYO1DO94832 1006 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 FYNP06241 537 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 SPATA31D3P0C874 917 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 IL10P22301 178 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 PRKACBP22694 351 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 KRR1Q13601 381 aaKnown RBP9.43□□□□□ -0.9
PSEN1-205ENST00000406768 BTG3Q14201 252 aaPredicted RBP9.43□□□□□ -0.9
PSEN1-205ENST00000406768 ASTE1Q2TB18 679 aaPredicted RBP9.43□□□□□ -0.9
PSEN1-205ENST00000406768 WDR44Q5JSH3 913 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 TBC1D9BQ66K14 1250 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 SPATA31D4Q6ZUB0 917 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 ATG9AQ7Z3C6 839 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 TTC39CQ8N584 583 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 ADCY4Q8NFM4 1077 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 PRICKLE1Q96MT3 831 aaPredicted RBP9.43□□□□□ -0.9
PSEN1-205ENST00000406768 CITED4Q96RK1 184 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 TRPV5Q9NQA5 729 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 DDX43Q9NXZ2 648 aaKnown RBP9.43□□□□□ -0.9
PSEN1-205ENST00000406768 SEPT10Q9P0V9 454 aa9.43□□□□□ -0.9
PSEN1-205ENST00000406768 TMEM114B3SHH9 223 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 C6orf222P0C671 652 aaPredicted RBP9.42□□□□□ -0.9
PSEN1-205ENST00000406768 RFX5P48382 616 aaPredicted RBP9.42□□□□□ -0.9
PSEN1-205ENST00000406768 TRIM25Q14258 630 aaKnown RBP9.42□□□□□ -0.9
PSEN1-205ENST00000406768 DEPDC1Q5TB30 811 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 LRRC8EQ6NSJ5 796 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 GALNT18Q6P9A2 607 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 MRPL47Q9HD33 250 aaKnown RBP9.42□□□□□ -0.9
PSEN1-205ENST00000406768 LRRC4BQ9NT99 713 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 IGSF9Q9P2J2 1179 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 LGALS13Q9UHV8 139 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 SYNPO2Q9UMS6 1093 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 PRR5-ARHGAP8B1AHC4 643 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 FAM25AB3EWG3 89 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 FAM25CB3EWG5 89 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 FAM25GB3EWG6 89 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 J3QRK9 145 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 CCRL2O00421 344 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 SNPHO15079 494 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 PHGDHO43175 533 aaKnown RBP9.42□□□□□ -0.9
PSEN1-205ENST00000406768 FARP2O94887 1054 aaPredicted RBP9.42□□□□□ -0.9
PSEN1-205ENST00000406768 ARHGAP8P85298 464 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 MTM1Q13496 603 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 PDK1Q15118 436 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 SMU1Q2TAY7 513 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 PPM1LQ5SGD2 360 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 OGFOD2Q6N063 350 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 ATG14Q6ZNE5 492 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 TTC7BQ86TV6 843 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 RHOT1Q8IXI2 618 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 FAM178BQ8IXR5 827 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 FBXW8Q8N3Y1 598 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 ST13P5Q8NFI4 369 aaPredicted RBP9.42□□□□□ -0.9
PSEN1-205ENST00000406768 FBXL8Q96CD0 374 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 CDHR1Q96JP9 859 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 PANX3Q96QZ0 392 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 FRMD8Q9BZ67 464 aaPredicted RBP9.42□□□□□ -0.9
PSEN1-205ENST00000406768 DNAJC18Q9H819 358 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 AREL1O15033 823 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 DGKIO75912 1065 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 SNRPAP09012 282 aaKnown RBP9.42□□□□□ -0.9
PSEN1-205ENST00000406768 THRAP10827 490 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 AKR1B1P15121 316 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 PTGS2P35354 604 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 C11orf63Q6NUN7 778 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 PLD3Q8IV08 490 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 SLC15A3Q8IY34 581 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 TCAIMQ8N3R3 496 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 IP6K1Q92551 441 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 CGREF1Q99674 301 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 INTS2Q9H0H0 1204 aaKnown RBP9.42□□□□□ -0.9
PSEN1-205ENST00000406768 RAD21L1Q9H4I0 556 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.42□□□□□ -0.9
PSEN1-205ENST00000406768 C12orf4Q9NQ89 552 aa9.42□□□□□ -0.9
PSEN1-205ENST00000406768 C2orf71A6NGG8 1288 aa9.41□□□□□ -0.9
PSEN1-205ENST00000406768 WDR64B1ANS9 1081 aa9.41□□□□□ -0.9
PSEN1-205ENST00000406768 TRIM49D1C9J1S8 452 aa9.41□□□□□ -0.9
PSEN1-205ENST00000406768 FAM47E-STBD1D6RA91 191 aa9.41□□□□□ -0.9
PSEN1-205ENST00000406768 RAD51BO15315 384 aa9.41□□□□□ -0.9
PSEN1-205ENST00000406768 ATMINO43313 823 aaPredicted RBP9.41□□□□□ -0.9
PSEN1-205ENST00000406768 CRTAMO95727 393 aa9.41□□□□□ -0.9
PSEN1-205ENST00000406768 KRT7P08729 469 aa9.41□□□□□ -0.9
PSEN1-205ENST00000406768 WEE2P0C1S8 567 aa9.41□□□□□ -0.9
PSEN1-205ENST00000406768 PHKA2P46019 1235 aa9.41□□□□□ -0.9
PSEN1-205ENST00000406768 GEN1Q17RS7 908 aa9.41□□□□□ -0.9
PSEN1-205ENST00000406768 XKR5Q6UX68 686 aa9.41□□□□□ -0.9
PSEN1-205ENST00000406768 ALG3Q92685 438 aa9.41□□□□□ -0.9
PSEN1-205ENST00000406768 CENPOQ9BU64 300 aa9.41□□□□□ -0.9
PSEN1-205ENST00000406768 OSBPL11Q9BXB4 747 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms