RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 KMT2EQ8IZD2 1858 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 BICDL2A1A5D9 508 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 FAM170BA6NMN3 283 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 H0Y858 1186 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 ABL1P00519 1130 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 DDX6P26196 483 aaKnown RBP eCLIP19.29■□□□□ 0.681e-6■■■■■ 46.4
PTPRN2-204ENST00000404321 SOX9P48436 509 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 NHLH1Q02575 133 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 FCHO2Q0JRZ9 810 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 INCA1Q0VD86 236 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 LRMPQ12912 555 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 WDR44Q5JSH3 913 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 FRMD5Q7Z6J6 570 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 FILIP1Q7Z7B0 1213 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 CRYBG2Q8N1P7 616 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 CELF5Q8N6W0 485 aaKnown RBP19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 ARL14EPQ8N8R7 260 aaPredicted RBP19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 WHAMMQ8TF30 809 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 SMARCD1Q96GM5 515 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 NT5C1AQ9BXI3 368 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 CLSTN2Q9H4D0 955 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 TDP1Q9NUW8 608 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 FAM86C1Q9NVL1 165 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 PIAS3Q9Y6X2 628 aa19.29■□□□□ 0.68
PTPRN2-204ENST00000404321 TRAV19A0A0A6YYK7 116 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 ARNTLO00327 626 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 CHADO15335 359 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 CILPO75339 1184 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 BEST1O76090 585 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 CKMP06732 381 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 WEE1P30291 646 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 PTPN5P54829 565 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 TNK2Q07912 1038 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 TAF10Q12962 218 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 CCDC105Q8IYK2 499 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 TRIML1Q8N9V2 468 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 DTWD2Q8NBA8 298 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 SCAMP5Q8TAC9 235 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 RIN3Q8TB24 985 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 CSGALNACT1Q8TDX6 532 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 JAKMIP2Q96AA8 810 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 PRRX2Q99811 253 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 SMOQ99835 787 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 DDX23Q9BUQ8 820 aaKnown RBP19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 SRRTQ9BXP5 876 aaKnown RBP19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 METTL14Q9HCE5 456 aaKnown RBP19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 LTB4R2Q9NPC1 389 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 DMAP1Q9NPF5 467 aaPredicted RBP19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 OBP2AQ9NY56 170 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 GTSE1Q9NYZ3 720 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 TRPM5Q9NZQ8 1165 aa19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 NDRG2Q9UN36 371 aaKnown RBP19.28■□□□□ 0.68
PTPRN2-204ENST00000404321 SHISA7A6NL88 538 aa19.27■□□□□ 0.68
PTPRN2-204ENST00000404321 GLULP15104 373 aa19.27■□□□□ 0.68
PTPRN2-204ENST00000404321 KPNA1P52294 538 aaPredicted RBP19.27■□□□□ 0.68
PTPRN2-204ENST00000404321 MAP3K7CLP57077 242 aa19.27■□□□□ 0.68
PTPRN2-204ENST00000404321 ZNF852Q6ZMS4 543 aa19.27■□□□□ 0.68
PTPRN2-204ENST00000404321 NUP93Q8N1F7 819 aa19.27■□□□□ 0.68
PTPRN2-204ENST00000404321 ZMIZ2Q8NF64 920 aa19.27■□□□□ 0.68
PTPRN2-204ENST00000404321 CYFIP2Q96F07 1278 aa19.27■□□□□ 0.68
PTPRN2-204ENST00000404321 CEP295NLQ96MC4 621 aa19.27■□□□□ 0.68
PTPRN2-204ENST00000404321 TTLL2Q9BWV7 592 aa19.27■□□□□ 0.68
PTPRN2-204ENST00000404321 CISHQ9NSE2 258 aa19.27■□□□□ 0.68
PTPRN2-204ENST00000404321 ZMYM5Q9UJ78 669 aa19.27■□□□□ 0.68
PTPRN2-204ENST00000404321 ZNF840PA6NDX5 716 aa19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 HDCP19113 662 aa19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 TARSP26639 723 aaKnown RBP19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 YWHAQP27348 245 aa19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 FMO5P49326 533 aa19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 SLC5A3P53794 718 aa19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 ARHGAP29Q52LW3 1261 aa19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 TRIM68Q6AZZ1 485 aa19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 HEXIM2Q96MH2 286 aaKnown RBP19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 PHOX2BQ99453 314 aa19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 TRPV5Q9NQA5 729 aa19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 GKN1Q9NS71 199 aa19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 LMBRD1Q9NUN5 540 aa19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 THG1LQ9NWX6 298 aaKnown RBP19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 EHD2Q9NZN4 543 aa19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 GCNT4Q9P109 453 aa19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 COQ4Q9Y3A0 265 aa19.26■□□□□ 0.67
PTPRN2-204ENST00000404321 USP17L7P0C7H9 530 aa19.25■□□□□ 0.67
PTPRN2-204ENST00000404321 FAM200BP0CF97 657 aa19.25■□□□□ 0.67
PTPRN2-204ENST00000404321 TRIM21P19474 475 aaKnown RBP19.25■□□□□ 0.67
PTPRN2-204ENST00000404321 NUBP1P53384 320 aa19.25■□□□□ 0.67
PTPRN2-204ENST00000404321 CLEC17AQ6ZS10 378 aa19.25■□□□□ 0.67
PTPRN2-204ENST00000404321 CREBRFQ8IUR6 639 aa19.25■□□□□ 0.67
PTPRN2-204ENST00000404321 FAM3CQ92520 227 aa19.25■□□□□ 0.67
PTPRN2-204ENST00000404321 ATOH1Q92858 354 aaPredicted RBP19.25■□□□□ 0.67
PTPRN2-204ENST00000404321 FBXO32Q969P5 355 aa19.25■□□□□ 0.67
PTPRN2-204ENST00000404321 IPO9Q96P70 1041 aaKnown RBP19.25■□□□□ 0.67
PTPRN2-204ENST00000404321 SLITRK1Q96PX8 696 aa19.25■□□□□ 0.67
PTPRN2-204ENST00000404321 HNRNPABQ99729 332 aaKnown RBP19.25■□□□□ 0.67
PTPRN2-204ENST00000404321 NUP62CLQ9H1M0 184 aa19.25■□□□□ 0.67
PTPRN2-204ENST00000404321 DLGAP2Q9P1A6 1054 aa19.25■□□□□ 0.67
PTPRN2-204ENST00000404321 TNFRSF10BO14763 440 aa19.24■□□□□ 0.67
PTPRN2-204ENST00000404321 CUL2Q13617 745 aa19.24■□□□□ 0.67
PTPRN2-204ENST00000404321 CC2D1AQ6P1N0 951 aaPredicted RBP19.24■□□□□ 0.67
PTPRN2-204ENST00000404321 GPRIN1Q7Z2K8 1008 aa19.24■□□□□ 0.67
PTPRN2-204ENST00000404321 MED15Q96RN5 788 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms