RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 NOX1Q9Y5S8 564 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 SNX14Q9Y5W7 946 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 A0A1W2PS29 197 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 MYADML2A6NDP7 307 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 MARCH11A6NNE9 402 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 DIRC3C9JPN6 131 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 M0R3H8 397 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 PCDH17O14917 1159 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 KCNQ3O43525 872 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 RHOP08100 348 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 PPP3CBP16298 524 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 KLRK1P26718 216 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 MST1P26927 711 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 LRPAP1P30533 357 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 SELENOPP49908 381 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 PLP2Q04941 152 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 TP53BP2Q13625 1128 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 PRKG1Q13976 671 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 PTK2BQ14289 1009 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 NFIXQ14938 502 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 PRKD1Q15139 912 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 MAPKAPK3Q16644 382 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 BEAN1Q3B7T3 259 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 USP39Q53GS9 565 aaKnown RBP4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 SPDYAQ5MJ70 313 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 TMPRSS6Q8IU80 811 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 SLC15A3Q8IY34 581 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 SMAP1Q8IYB5 467 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 SPARTQ8N0X7 666 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 C11orf44Q8N8P7 122 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 ATG4AQ8WYN0 398 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 LPIN2Q92539 896 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 PAGR1Q9BTK6 254 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 TMEM120AQ9BXJ8 343 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 ACTRT3Q9BYD9 372 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 TPSD1Q9BZJ3 242 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 KLC2Q9H0B6 622 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 DHX36Q9H2U1 1008 aaKnown RBP4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 NECTIN3Q9NQS3 549 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 RRN3Q9NYV6 651 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 CEP72Q9P209 647 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 LPAR3Q9UBY5 353 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 CAPN11Q9UMQ6 739 aa4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 ARID1BQ8NFD5 2236 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P17-201ENST00000403495 TRGV11A0A075B6L2 103 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 AQP7P3A6NL99 342 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 K7ESM1 405 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 RNASET2O00584 256 aaKnown RBP4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 CD3EAPO15446 510 aaKnown RBP4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 DNPH1O43598 174 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 COQ9O75208 318 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 PPFIA4O75335 1185 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 CDKL5O76039 1030 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 INMTO95050 263 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 SPDEFO95238 335 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 C1SP09871 688 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 SRGAP2BP0DMP2 458 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 DDX6P26196 483 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 MAPK9P45984 424 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 VAV2P52735 878 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 DGCR2P98153 550 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 SATB1Q01826 763 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 GPS1Q13098 491 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 FHL3Q13643 280 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 E2F2Q14209 437 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 R3HDM1Q15032 1099 aaKnown RBP4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 MICALCLQ6ZW33 695 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 ZNF276Q8N554 614 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 STT3BQ8TCJ2 826 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 SMCR8Q8TEV9 937 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 TRAPPC12Q8WVT3 735 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 EIF2AQ9BY44 585 aaKnown RBP4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 AMBRA1Q9C0C7 1298 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 C9orf78Q9NZ63 289 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 ANKFY1Q9P2R3 1169 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 HS3ST4Q9Y661 456 aa4.56□□□□□ -1.68
HMGB1P17-201ENST00000403495 E7ENX8 843 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 MUSKO15146 869 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 TRIAP1O43715 76 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 AGR2O95994 175 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 DHRS4L1P0CG22 281 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 IDEP14735 1019 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 NPPBP16860 134 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 AKT1P31749 480 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 UQCRC1P31930 480 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 CLCN2P51788 898 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 PGDP52209 483 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 PNLIPRP1P54315 467 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 TAP2Q03519 686 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 HLXQ14774 488 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 SF3B3Q15393 1217 aaKnown RBP4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 SLC5A9Q2M3M2 681 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 SPDYE7PQ495Y7 208 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 NRN1LQ496H8 165 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 SLC9A4Q6AI14 798 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 ABLIM2Q6H8Q1 611 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 MRNIPQ6NTE8 343 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 CLEC9AQ6UXN8 241 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 DPY19L3Q6ZPD9 716 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 RRAGAQ7L523 313 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 303.7 ms