RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 ZNF699Q32M78 642 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZCWPW2Q504Y3 356 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 ISM2Q6H9L7 571 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 SPOPLQ6IQ16 392 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 FAM171BQ6P995 826 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 LYPD8Q6UX82 237 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 TPRG1Q6ZUI0 275 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 SV2AQ7L0J3 742 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 DPH6Q7L8W6 267 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 ALYREFQ86V81 257 aaKnown RBP6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 ARID3BQ8IVW6 561 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 CCDC105Q8IYK2 499 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 FAM186BQ8IYM0 893 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 GUF1Q8N442 669 aaKnown RBP6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 DTWD2Q8NBA8 298 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 TTC8Q8TAM2 541 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZFYVE19Q96K21 471 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 LRRC3BQ96PB8 259 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 TRMT61BQ9BVS5 477 aaKnown RBP6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 SDCBP2Q9H190 292 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 KCNH6Q9H252 994 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 SNX25Q9H3E2 840 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 MMRN2Q9H8L6 949 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 BRD9Q9H8M2 597 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 HEBP1Q9NRV9 189 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 CDH9Q9ULB4 789 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 MTF2Q9Y483 593 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 PCDHA5Q9Y5H7 936 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 PTPRDP23468 1912 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 MIA3Q5JRA6 1907 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 DENND4CQ5VZ89 1909 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZNF638Q14966 1978 aaKnown RBP6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZNF292O60281 2723 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 COL4A2P08572 1712 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 NUP210Q8TEM1 1887 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 GREB1Q4ZG55 1949 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 KANSL1LA0AUZ9 987 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 TRIM49BA6NDI0 452 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 SHISA7A6NL88 538 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 A8MXQ7 604 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 CFAP99D6REC4 459 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 CLDN5O00501 218 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 TACC1O75410 805 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 TADA3O75528 432 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 KIF20AO95235 890 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 STAU1O95793 577 aaKnown RBP6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 HLA-DRAP01903 254 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 CSH1P0DML2 217 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 CSH2P0DML3 217 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 GLULP15104 373 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 PSMC3P17980 439 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 PTPN1P18031 435 aaKnown RBP6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 TARSP26639 723 aaKnown RBP6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 CDC25CP30307 473 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 GRIK1P39086 918 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 PIK3CAP42336 1068 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 PRCPP42785 496 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 SOX9P48436 509 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 PMS1P54277 932 aaKnown RBP6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 CACNA2D1P54289 1103 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 STARD6P59095 220 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 RPL10AP62906 217 aaKnown RBP6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 CLDN10P78369 228 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 PFKPQ01813 784 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 PPP3CAQ08209 521 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 SMARCB1Q12824 385 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 ADAM9Q13443 819 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZACNQ401N2 412 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 CFAP221Q4G0U5 840 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 ARHGAP15Q53QZ3 475 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZNF667Q5HYK9 610 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 TXNDC8Q6A555 127 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 PHLDB3Q6NSJ2 640 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 C4orf50Q6ZRC1 276 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 MFSD6LQ8IWD5 586 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 YAF2Q8IY57 180 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 MAB21L3Q8N8X9 362 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZNF511Q8NB15 262 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 TTC16Q8NEE8 873 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 PJA1Q8NG27 643 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 RIN3Q8TB24 985 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 MYCBPAPQ8TBZ2 947 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 SPATA18Q8TC71 538 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 BAP1Q92560 729 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 ATOH1Q92858 354 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 SMARCE1Q969G3 411 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 SYAP1Q96A49 352 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 PCED1BQ96HM7 432 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 GCNAQ96QF7 691 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 SLC46A2Q9BY10 475 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 B3GNT5Q9BYG0 378 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZNF518BQ9C0D4 1074 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 GPR88Q9GZN0 384 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 TASP1Q9H6P5 420 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 TRPV4Q9HBA0 871 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 TRPC7Q9HCX4 862 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 ABCB6Q9NP58 842 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 LTB4R2Q9NPC1 389 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 TMEM30AQ9NV96 361 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 DLGAP2Q9P1A6 1054 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms