RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 KCNT2Q6UVM3 1135 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 DDX27Q96GQ7 796 aaKnown RBP12.33□□□□□ -0.44
SKA3-203ENST00000400018 NAPGQ99747 312 aaPredicted RBP12.33□□□□□ -0.44
SKA3-203ENST00000400018 IL23AQ9NPF7 189 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 KCND1Q9NSA2 647 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 GPATCH2LQ9NWQ4 482 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 TCRBV7S2A1N4TA0A589 114 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 AMHP03971 560 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 ODC1P11926 461 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 SKIP12755 728 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 WARSP23381 471 aaKnown RBP12.33□□□□□ -0.44
SKA3-203ENST00000400018 CTXN3Q4LDR2 81 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 LCLAT1Q6UWP7 414 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 RNF19BQ6ZMZ0 732 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 FAM35AQ86V20 835 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 TOP6BLQ8N6T0 577 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 GIPC2Q8TF65 315 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 FAM149B1Q96BN6 582 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 C18orf8Q96DM3 657 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 SUSD3Q96L08 255 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 HERPUD2Q9BSE4 406 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 C17orf80Q9BSJ5 609 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 MAP3K6O95382 1288 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 PAEPP09466 180 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 GZMAP12544 262 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 RPL9P32969 192 aaKnown RBP12.32□□□□□ -0.44
SKA3-203ENST00000400018 AARSP49588 968 aaKnown RBP eCLIP12.32□□□□□ -0.44
SKA3-203ENST00000400018 POU5F1Q01860 360 aaKnown RBP12.32□□□□□ -0.44
SKA3-203ENST00000400018 ZFYVE27Q5T4F4 411 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 DCUN1D2Q6PH85 259 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 PEX26Q7Z412 305 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 ARFGAP1Q8N6T3 406 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 SLC35F5Q8WV83 523 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 APBB2Q92870 758 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 AP1M1Q9BXS5 423 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 ZMYND10O75800 440 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 VNN2O95498 520 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 STAU1O95793 577 aaKnown RBP12.32□□□□□ -0.44
SKA3-203ENST00000400018 CPB1P15086 417 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 USP46P62068 366 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 C2orf54Q08AI8 447 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 SHHQ15465 462 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 PKDCCQ504Y2 493 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 DNAJC24Q6P3W2 148 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 LIMS2Q7Z4I7 341 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 NT5DC3Q86UY8 548 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 ZWILCHQ9H900 591 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 UBN1Q9NPG3 1134 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 HESX1Q9UBX0 185 aa12.32□□□□□ -0.44
SKA3-203ENST00000400018 M0QZQ0 153 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 OR1D2P34982 312 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 HNRNPH2P55795 449 aaKnown RBP12.31□□□□□ -0.44
SKA3-203ENST00000400018 YWHAEP62258 255 aaKnown RBP12.31□□□□□ -0.44
SKA3-203ENST00000400018 DUSP4Q13115 394 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 CNPY4Q8N129 248 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 CRYBG2Q8N1P7 616 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 SEPT5Q99719 369 aaPredicted RBP12.31□□□□□ -0.44
SKA3-203ENST00000400018 HEMGNQ9BXL5 484 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 PCDHGC3Q9UN70 934 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 MAGED2Q9UNF1 606 aaPredicted RBP12.31□□□□□ -0.44
SKA3-203ENST00000400018 DNAH14Q0VDD8 3507 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 RFXAPO00287 272 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 SPOPO43791 374 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 CYP1A2P05177 515 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 GRIK1P39086 918 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 AMPD2Q01433 879 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 INTS6LQ5JSJ4 861 aaKnown RBP12.31□□□□□ -0.44
SKA3-203ENST00000400018 SYPL2Q5VXT5 272 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 LRRC43Q8N309 656 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 NOA1Q8NC60 698 aaKnown RBP12.31□□□□□ -0.44
SKA3-203ENST00000400018 SELENOOQ9BVL4 669 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 TSPYL1Q9H0U9 437 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 GEMIN8Q9NWZ8 242 aaKnown RBP12.31□□□□□ -0.44
SKA3-203ENST00000400018 CEP83Q9Y592 693 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 YJEFN3A6XGL0 299 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 E7ENQ6 273 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 MDM4O15151 490 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 CCP110O43303 1012 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 GJB5O95377 273 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 KRT3P12035 628 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 DNAJB1P25685 340 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 IL1R2P27930 398 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 MAGEA10P43363 369 aaPredicted RBP12.31□□□□□ -0.44
SKA3-203ENST00000400018 TKTL1P51854 596 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 ADCY2Q08462 1091 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 SCYL2Q6P3W7 929 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 PHF13Q86YI8 300 aaPredicted RBP12.31□□□□□ -0.44
SKA3-203ENST00000400018 RNF25Q96BH1 459 aaPredicted RBP12.31□□□□□ -0.44
SKA3-203ENST00000400018 ZNF689Q96CS4 500 aaPredicted RBP12.31□□□□□ -0.44
SKA3-203ENST00000400018 IGSF21Q96ID5 467 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 OSBPL9Q96SU4 736 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 ULBP1Q9BZM6 244 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 ELAC1Q9H777 363 aaKnown RBP12.31□□□□□ -0.44
SKA3-203ENST00000400018 C10orf88Q9H8K7 445 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 RSPH14Q9UHP6 348 aa12.31□□□□□ -0.44
SKA3-203ENST00000400018 ABHD14A-ACY1A0A1B0GW23 586 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 TCRBV5S1A1TA0A578 114 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 MED7O43513 233 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 TLL1O43897 1013 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 CD48P09326 243 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms