RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 ZNF564Q8TBZ8 553 aaPredicted RBP13.82□□□□□ -0.2
TOP3B-202ENST00000398793 ATP6V1G3Q96LB4 118 aa13.82□□□□□ -0.2
TOP3B-202ENST00000398793 DNAJC17Q9NVM6 304 aaKnown RBP13.82□□□□□ -0.2
TOP3B-202ENST00000398793 SAE1Q9UBE0 346 aaPredicted RBP13.82□□□□□ -0.2
TOP3B-202ENST00000398793 SDK1Q7Z5N4 2213 aa13.82□□□□□ -0.2
TOP3B-202ENST00000398793 PTGESO14684 152 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 ATF7P17544 494 aaPredicted RBP13.81□□□□□ -0.2
TOP3B-202ENST00000398793 TPP2P29144 1249 aaPredicted RBP13.81□□□□□ -0.2
TOP3B-202ENST00000398793 KCNJ1P48048 391 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 ADAM17P78536 824 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 RPS6KA1Q15418 735 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 ODF2Q5BJF6 829 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 TAF2Q6P1X5 1199 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 CPLX4Q7Z7G2 160 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 SERINC5Q86VE9 423 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 ZNF410Q86VK4 478 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 BEST2Q8NFU1 509 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 TLR10Q9BXR5 811 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 DDX47Q9H0S4 455 aaKnown RBP13.81□□□□□ -0.2
TOP3B-202ENST00000398793 PIDD1Q9HB75 910 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 GPATCH2LQ9NWQ4 482 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 NOCTQ9UK39 431 aaKnown RBP13.81□□□□□ -0.2
TOP3B-202ENST00000398793 STYXL1Q9Y6J8 313 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 SPTBN5Q9NRC6 3674 aaKnown RBP13.81□□□□□ -0.2
TOP3B-202ENST00000398793 SSU72P8A0A1W2PR75 194 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 RPL17P18621 184 aaKnown RBP13.81□□□□□ -0.2
TOP3B-202ENST00000398793 COMTP21964 271 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 PROZP22891 400 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 MAGEA8P43361 318 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 SCNN1BP51168 640 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 ATXN1P54253 815 aaKnown RBP13.81□□□□□ -0.2
TOP3B-202ENST00000398793 RBP5P82980 135 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 SMAD1Q15797 465 aaKnown RBP13.81□□□□□ -0.2
TOP3B-202ENST00000398793 LACTB2Q53H82 288 aaPredicted RBP13.81□□□□□ -0.2
TOP3B-202ENST00000398793 CCHCR1Q8TD31 782 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 TRIM4Q9C037 500 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 CYTH4Q9UIA0 394 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 GTPBP10A4D1E9 387 aaKnown RBP13.81□□□□□ -0.2
TOP3B-202ENST00000398793 CYB561D2O14569 222 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 ABL2P42684 1182 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 CDR2Q01850 454 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 FBXO47Q5MNV8 452 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 KCNK16Q96T55 309 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 KRT12Q99456 494 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 GORASP1Q9BQQ3 440 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 SNX25Q9H3E2 840 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 ALG6Q9Y672 507 aa13.81□□□□□ -0.2
TOP3B-202ENST00000398793 TCRBV7S2A1N4TA0A589 114 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 F8VP50 259 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 IMPDH2P12268 514 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 ACO1P21399 889 aaKnown RBP13.8□□□□□ -0.2
TOP3B-202ENST00000398793 PPP1R15BQ5SWA1 713 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 GKAP1Q5VSY0 366 aaPredicted RBP13.8□□□□□ -0.2
TOP3B-202ENST00000398793 TXNRD3NBQ6F5E7 133 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 RTN4RL1Q86UN2 441 aaPredicted RBP13.8□□□□□ -0.2
TOP3B-202ENST00000398793 ERICH1Q86X53 443 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 DDX42Q86XP3 938 aaKnown RBP eCLIP13.8□□□□□ -0.2
TOP3B-202ENST00000398793 SCN4BQ8IWT1 228 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 SLC2A14Q8TDB8 520 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 TEKT4Q8WW24 435 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 ATG4AQ8WYN0 398 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 TSPYL2Q9H2G4 693 aaPredicted RBP13.8□□□□□ -0.2
TOP3B-202ENST00000398793 NGRNQ9NPE2 291 aaKnown RBP13.8□□□□□ -0.2
TOP3B-202ENST00000398793 STIM2Q9P246 746 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 TSPAN16Q9UKR8 245 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 NME7Q9Y5B8 376 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 COL6A3P12111 3177 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 A0A0G2JMZ2 1700 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 DPPA5A6NC42 116 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 A6NHS1 94 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 GOLGA6L10A6NI86 522 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 THP07101 528 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 KRT10P13645 584 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 NDUFV1P49821 464 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 C1QTNF8P60827 252 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 C15orf59Q2T9L4 293 aaPredicted RBP13.8□□□□□ -0.2
TOP3B-202ENST00000398793 GOLGA7BQ2TAP0 167 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 TPCN2Q8NHX9 752 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 AUTS2Q8WXX7 1259 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 CCT6BQ92526 530 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 CPXM1Q96SM3 734 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 HIPK3Q9H422 1215 aa13.8□□□□□ -0.2
TOP3B-202ENST00000398793 KPNA7A9QM74 516 aa13.79□□□□□ -0.2
TOP3B-202ENST00000398793 HUS1O60921 280 aa13.79□□□□□ -0.2
TOP3B-202ENST00000398793 PIGRP01833 764 aa13.79□□□□□ -0.2
TOP3B-202ENST00000398793 FAM153BP0C7A2 387 aa13.79□□□□□ -0.2
TOP3B-202ENST00000398793 SPATA31D3P0C874 917 aa13.79□□□□□ -0.2
TOP3B-202ENST00000398793 HSPA6P17066 643 aa13.79□□□□□ -0.2
TOP3B-202ENST00000398793 SOWAHAQ2M3V2 549 aa13.79□□□□□ -0.2
TOP3B-202ENST00000398793 TCTN1Q2MV58 587 aa13.79□□□□□ -0.2
TOP3B-202ENST00000398793 FAM153CQ494X1 144 aa13.79□□□□□ -0.2
TOP3B-202ENST00000398793 GLE1Q53GS7 698 aaKnown RBP13.79□□□□□ -0.2
TOP3B-202ENST00000398793 MDH1BQ5I0G3 518 aa13.79□□□□□ -0.2
TOP3B-202ENST00000398793 C9orf57Q5W0N0 161 aa13.79□□□□□ -0.2
TOP3B-202ENST00000398793 C15orf39Q6ZRI6 1047 aa13.79□□□□□ -0.2
TOP3B-202ENST00000398793 SPATA31D4Q6ZUB0 917 aa13.79□□□□□ -0.2
TOP3B-202ENST00000398793 MMGT1Q8N4V1 131 aa13.79□□□□□ -0.2
TOP3B-202ENST00000398793 ARFGAP2Q8N6H7 521 aa13.79□□□□□ -0.2
TOP3B-202ENST00000398793 JOSD2Q8TAC2 188 aa13.79□□□□□ -0.2
TOP3B-202ENST00000398793 UHMK1Q8TAS1 419 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms