RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 RTKNQ9BST9 563 aa14.3□□□□□ -0.12
VCX3A-202ENST00000398729 TDP1Q9NUW8 608 aa14.3□□□□□ -0.12
VCX3A-202ENST00000398729 EHD2Q9NZN4 543 aa14.3□□□□□ -0.12
VCX3A-202ENST00000398729 MAPK8IP1Q9UQF2 711 aa14.3□□□□□ -0.12
VCX3A-202ENST00000398729 NME7Q9Y5B8 376 aa14.3□□□□□ -0.12
VCX3A-202ENST00000398729 PTPRDP23468 1912 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 SPECC1L-ADORA2AF8WAN1 911 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 IKBKBO14920 756 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 MAPK13O15264 365 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 P4HA1P13674 534 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 NR2F2P24468 414 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 RPL13P26373 211 aaKnown RBP14.29□□□□□ -0.12
VCX3A-202ENST00000398729 CTHP32929 405 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 DLG4P78352 724 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 LMNB2Q03252 620 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 ZNF268Q14587 947 aaPredicted RBP14.29□□□□□ -0.12
VCX3A-202ENST00000398729 NFIL3Q16649 462 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 SGSM1Q2NKQ1 1148 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 ZACNQ401N2 412 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 MAMSTRQ6ZN01 415 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 DENND5BQ6ZUT9 1274 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 GUF1Q8N442 669 aaKnown RBP14.29□□□□□ -0.12
VCX3A-202ENST00000398729 USP13Q92995 863 aaPredicted RBP14.29□□□□□ -0.12
VCX3A-202ENST00000398729 IER2Q9BTL4 223 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 ELOVL4Q9GZR5 314 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 CHRDQ9H2X0 955 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 DPEP3Q9H4B8 488 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 SMYD3Q9H7B4 428 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 LMAN1LQ9HAT1 526 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 TRPC7Q9HCX4 862 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 GTSE1Q9NYZ3 720 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 CDV3Q9UKY7 258 aaKnown RBP14.29□□□□□ -0.12
VCX3A-202ENST00000398729 USP18Q9UMW8 372 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 GREB1Q4ZG55 1949 aa14.29□□□□□ -0.12
VCX3A-202ENST00000398729 TRAV19A0A0A6YYK7 116 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 F8VP50 259 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 VNN1O95497 513 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 ADRB1P08588 477 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 USP17L7P0C7H9 530 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 CHRNB1P11230 501 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 SOX9P48436 509 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 PDE6CP51160 858 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 VAMP7P51809 220 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 CDH8P55286 799 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 FAM160A1Q05DH4 1040 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 LRRC32Q14392 662 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 PPP2R5DQ14738 602 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 ITPRIPL2Q3MIP1 535 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 CC2D1AQ6P1N0 951 aaPredicted RBP14.28□□□□□ -0.12
VCX3A-202ENST00000398729 INTS8Q75QN2 995 aaKnown RBP14.28□□□□□ -0.12
VCX3A-202ENST00000398729 SV2AQ7L0J3 742 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 B3GALNT2Q8NCR0 500 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 TTC8Q8TAM2 541 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 SECISBP2LQ93073 1101 aaKnown RBP14.28□□□□□ -0.12
VCX3A-202ENST00000398729 TNIP3Q96KP6 325 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 FAM126AQ9BYI3 521 aaPredicted RBP14.28□□□□□ -0.12
VCX3A-202ENST00000398729 GKN1Q9NS71 199 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 RMND1Q9NWS8 449 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 CCL26Q9Y258 94 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.28□□□□□ -0.12
VCX3A-202ENST00000398729 FRYQ5TBA9 3013 aa14.28□□□□□ -0.12
VCX3A-202ENST00000398729 KIF26AQ9ULI4 1882 aaPredicted RBP14.27□□□□□ -0.12
VCX3A-202ENST00000398729 ATP8B3O60423 1300 aa14.27□□□□□ -0.12
VCX3A-202ENST00000398729 CKMP06732 381 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 KRT13P13646 458 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 PSMC2P35998 433 aaKnown RBP14.27□□□□□ -0.13
VCX3A-202ENST00000398729 PIK3CAP42336 1068 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 RAP1GAPP47736 663 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 NOP14P78316 857 aaKnown RBP14.27□□□□□ -0.13
VCX3A-202ENST00000398729 TNK2Q07912 1038 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 SPEM2Q0P670 501 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 RUNX3Q13761 415 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 LPAL2Q16609 132 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 SCARA5Q6ZMJ2 495 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 FAM186BQ8IYM0 893 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 FMR1NBQ8N0W7 255 aaPredicted RBP14.27□□□□□ -0.13
VCX3A-202ENST00000398729 TAF4BQ92750 862 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 C8orf48Q96LL4 319 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 FAM83CQ9BQN1 747 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 B3GNT5Q9BYG0 378 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 ZNF518BQ9C0D4 1074 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 TRPM5Q9NZQ8 1165 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 ANAPC1Q9H1A4 1944 aa14.27□□□□□ -0.13
VCX3A-202ENST00000398729 C2orf78A6NCI8 922 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 AKAP3O75969 853 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 ASS1P00966 412 aaKnown RBP14.26□□□□□ -0.13
VCX3A-202ENST00000398729 PFKLP17858 780 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 HDCP19113 662 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 PPP3CCP48454 512 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 CCR3P51677 355 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 USP46P62068 366 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 ENPEPQ07075 957 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 ADAM9Q13443 819 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 PNOCQ13519 176 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 GAS6Q14393 721 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 MTF1Q14872 753 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 DGKKQ5KSL6 1271 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 TXNDC11Q6PKC3 985 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 ARL14EPQ8N8R7 260 aaPredicted RBP14.26□□□□□ -0.13
VCX3A-202ENST00000398729 ELMO3Q96BJ8 720 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms