RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 ST7Q9NRC1 585 aa19.33■□□□□ 0.69
MBD1-208ENST00000398493 TUBGCP4Q9UGJ1 667 aa19.33■□□□□ 0.69
MBD1-208ENST00000398493 FNDC1Q4ZHG4 1894 aaPredicted RBP19.33■□□□□ 0.69
MBD1-208ENST00000398493 FSCN2O14926 492 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 OPA1O60313 960 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 CILPO75339 1184 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 THP07101 528 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 CA3P07451 260 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 VDRP11473 427 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 PBX3P40426 434 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 RAP1GAPP47736 663 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 CDH8P55286 799 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 AADACL2Q6P093 401 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 URGCPQ8TCY9 931 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 SEC14L1Q92503 715 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 LRRC45Q96CN5 670 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 PCYOX1Q9UHG3 505 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 NR2E1Q9Y466 385 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 TMEM191CA6NGB0 347 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 GBP1P32455 592 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 DSC1Q08554 894 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 GRIK3Q13003 919 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 CYP1B1Q16678 543 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 LRRC43Q8N309 656 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 ERP44Q9BS26 406 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 TRIM7Q9C029 511 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 SMYD3Q9H7B4 428 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 WDR35Q9P2L0 1181 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 KANSL3Q9P2N6 904 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 BARX2Q9UMQ3 279 aaPredicted RBP19.32■□□□□ 0.68
MBD1-208ENST00000398493 CITO14578 2027 aa19.32■□□□□ 0.68
MBD1-208ENST00000398493 CASTOR2A6NHX0 329 aa19.31■□□□□ 0.68
MBD1-208ENST00000398493 F8W810 466 aa19.31■□□□□ 0.68
MBD1-208ENST00000398493 SSR1P43307 286 aaKnown RBP19.31■□□□□ 0.68
MBD1-208ENST00000398493 DRG2P55039 364 aaKnown RBP19.31■□□□□ 0.68
MBD1-208ENST00000398493 RNASELQ05823 741 aaKnown RBP19.31■□□□□ 0.68
MBD1-208ENST00000398493 PIGHQ14442 188 aaPredicted RBP19.31■□□□□ 0.68
MBD1-208ENST00000398493 CPNE8Q86YQ8 564 aa19.31■□□□□ 0.68
MBD1-208ENST00000398493 COLGALT2Q8IYK4 626 aa19.31■□□□□ 0.68
MBD1-208ENST00000398493 PRELID2Q8N945 189 aa19.31■□□□□ 0.68
MBD1-208ENST00000398493 SLC4A11Q8NBS3 891 aa19.31■□□□□ 0.68
MBD1-208ENST00000398493 HEXIM2Q96MH2 286 aaKnown RBP19.31■□□□□ 0.68
MBD1-208ENST00000398493 SDCBP2Q9H190 292 aa19.31■□□□□ 0.68
MBD1-208ENST00000398493 PSD3Q9NYI0 1048 aa19.31■□□□□ 0.68
MBD1-208ENST00000398493 PCDHA11Q9Y5I1 949 aa19.31■□□□□ 0.68
MBD1-208ENST00000398493 LINC01553A4QN01 128 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 XPOTO43592 962 aaKnown RBP19.3■□□□□ 0.68
MBD1-208ENST00000398493 GGCXP38435 758 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 FNTAP49354 379 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 CNGA2Q16280 664 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 CFAP58Q5T655 872 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 LLGL2Q6P1M3 1020 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 DENND1BQ6P3S1 775 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 CCDC137Q6PK04 289 aaKnown RBP19.3■□□□□ 0.68
MBD1-208ENST00000398493 FIBCD1Q8N539 461 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 WDTC1Q8N5D0 677 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 C3orf20Q8ND61 904 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 MRPL9Q9BYD2 267 aaKnown RBP19.3■□□□□ 0.68
MBD1-208ENST00000398493 HOMER3Q9NSC5 361 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 FEZ2Q9UHY8 353 aaPredicted RBP19.3■□□□□ 0.68
MBD1-208ENST00000398493 USTQ9Y2C2 406 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 NT5C1B-RDH14C9J2C7 533 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 DAPK3O43293 454 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 FAM153BP0C7A2 387 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 COILP38432 576 aaPredicted RBP19.3■□□□□ 0.68
MBD1-208ENST00000398493 STILQ15468 1287 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 FAM153CQ494X1 144 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 SGO2Q562F6 1265 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 JAMLQ86YT9 394 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 CCDC105Q8IYK2 499 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 KATNAL2Q8IYT4 538 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 C12orf50Q8NA57 414 aaPredicted RBP19.3■□□□□ 0.68
MBD1-208ENST00000398493 EXOC4Q96A65 974 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 C18orf8Q96DM3 657 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 DDX27Q96GQ7 796 aaKnown RBP19.3■□□□□ 0.68
MBD1-208ENST00000398493 DNAI2Q9GZS0 605 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 MIS12Q9H081 205 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 NKX2-4Q9H2Z4 354 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 SYNCQ9H7C4 482 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 VPS18Q9P253 973 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 FAM153AQ9UHL3 310 aa19.3■□□□□ 0.68
MBD1-208ENST00000398493 PPEF2O14830 753 aa19.29■□□□□ 0.68
MBD1-208ENST00000398493 RARAP10276 462 aa19.29■□□□□ 0.68
MBD1-208ENST00000398493 HSPA9P38646 679 aaKnown RBP19.29■□□□□ 0.68
MBD1-208ENST00000398493 SLC11A1P49279 550 aa19.29■□□□□ 0.68
MBD1-208ENST00000398493 CLCNKBP51801 687 aa19.29■□□□□ 0.68
MBD1-208ENST00000398493 INCA1Q0VD86 236 aa19.29■□□□□ 0.68
MBD1-208ENST00000398493 TUSC3Q13454 348 aa19.29■□□□□ 0.68
MBD1-208ENST00000398493 TRADDQ15628 312 aa19.29■□□□□ 0.68
MBD1-208ENST00000398493 LRIT3Q3SXY7 679 aa19.29■□□□□ 0.68
MBD1-208ENST00000398493 ODF2Q5BJF6 829 aa19.29■□□□□ 0.68
MBD1-208ENST00000398493 LRRC38Q5VT99 294 aa19.29■□□□□ 0.68
MBD1-208ENST00000398493 DUPD1Q68J44 220 aa19.29■□□□□ 0.68
MBD1-208ENST00000398493 TMEM173Q86WV6 379 aaPredicted RBP19.29■□□□□ 0.68
MBD1-208ENST00000398493 CCDC50Q8IVM0 306 aa19.29■□□□□ 0.68
MBD1-208ENST00000398493 LRRC52Q8N7C0 313 aa19.29■□□□□ 0.68
MBD1-208ENST00000398493 EXD1Q8NHP7 514 aa19.29■□□□□ 0.68
MBD1-208ENST00000398493 NT5C1AQ9BXI3 368 aa19.29■□□□□ 0.68
MBD1-208ENST00000398493 ELOVL4Q9GZR5 314 aa19.29■□□□□ 0.68
MBD1-208ENST00000398493 LRRC19Q9H756 370 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms