RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 USTQ9Y2C2 406 aa16.72■□□□□ 0.27
MBD1-207ENST00000398488 FOXN3O00409 490 aaPredicted RBP16.71■□□□□ 0.27
MBD1-207ENST00000398488 CFHP08603 1231 aa16.71■□□□□ 0.27
MBD1-207ENST00000398488 CD19P15391 556 aa16.71■□□□□ 0.27
MBD1-207ENST00000398488 PGFP49763 221 aa16.71■□□□□ 0.27
MBD1-207ENST00000398488 YWHAEP62258 255 aaKnown RBP16.71■□□□□ 0.27
MBD1-207ENST00000398488 SYCP1Q15431 976 aa16.71■□□□□ 0.27
MBD1-207ENST00000398488 CYP4A22Q5TCH4 519 aa16.71■□□□□ 0.27
MBD1-207ENST00000398488 OTOP3Q7RTS5 596 aa16.71■□□□□ 0.27
MBD1-207ENST00000398488 ITIH5Q86UX2 942 aa16.71■□□□□ 0.27
MBD1-207ENST00000398488 RNF135Q8IUD6 432 aa16.71■□□□□ 0.27
MBD1-207ENST00000398488 SHC3Q92529 594 aa16.71■□□□□ 0.27
MBD1-207ENST00000398488 JAKMIP2Q96AA8 810 aa16.71■□□□□ 0.27
MBD1-207ENST00000398488 MYRFLQ96LU7 910 aa16.71■□□□□ 0.27
MBD1-207ENST00000398488 SMOC2Q9H3U7 446 aa16.71■□□□□ 0.27
MBD1-207ENST00000398488 TSPY26PQ9H489 355 aa16.71■□□□□ 0.27
MBD1-207ENST00000398488 RTN4Q9NQC3 1192 aaKnown RBP16.71■□□□□ 0.27
MBD1-207ENST00000398488 EPS15L1Q9UBC2 864 aa16.71■□□□□ 0.27
MBD1-207ENST00000398488 NCANO14594 1321 aa16.71■□□□□ 0.27
MBD1-207ENST00000398488 O00370 1275 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 TRIM66O15016 1216 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 FAM200BP0CF97 657 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 CSH1P0DML2 217 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 CSH2P0DML3 217 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 KRT5P13647 590 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 MFAP3P55082 362 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 ZNF445P59923 1031 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 UBXN1Q04323 297 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 GOLGA7BQ2TAP0 167 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 PARM1Q6UWI2 310 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 DENND5BQ6ZUT9 1274 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 ZDHHC14Q8IZN3 488 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 UBA3Q8TBC4 463 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 DUSP16Q9BY84 665 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 ATXN3LQ9H3M9 355 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 DMAP1Q9NPF5 467 aaPredicted RBP16.7■□□□□ 0.26
MBD1-207ENST00000398488 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.7■□□□□ 0.26
MBD1-207ENST00000398488 TSPAN16Q9UKR8 245 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 NR2E1Q9Y466 385 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 BDP1A6H8Y1 2624 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 GABBR2O75899 941 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 PAEPP09466 180 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 VDRP11473 427 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 UCHL3P15374 230 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 ANXA13P27216 316 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 SLC5A3P53794 718 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 IFRD2Q12894 506 aaPredicted RBP16.7■□□□□ 0.26
MBD1-207ENST00000398488 DRAP1Q14919 205 aaPredicted RBP16.7■□□□□ 0.26
MBD1-207ENST00000398488 PKDCCQ504Y2 493 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 SGO2Q562F6 1265 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 RNF214Q8ND24 703 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 FGF14Q92915 247 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 TRMT2BQ96GJ1 504 aaKnown RBP16.7■□□□□ 0.26
MBD1-207ENST00000398488 TTLL2Q9BWV7 592 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 PLCB1Q9NQ66 1216 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 FAM207AQ9NSI2 230 aaPredicted RBP16.7■□□□□ 0.26
MBD1-207ENST00000398488 IL37Q9NZH6 218 aa16.7■□□□□ 0.26
MBD1-207ENST00000398488 ATP8B3O60423 1300 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 OBSL1O75147 1896 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 MYO10Q9HD67 2058 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 A0A1B0GTH6 734 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 ANHXE9PGG2 379 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 ZNF197O14709 1029 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 CYP26A1O43174 497 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 MICAL2O94851 1124 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 NPR3P17342 541 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 FCARP24071 287 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 CLCN1P35523 988 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 USP8P40818 1118 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 FANCCQ00597 558 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 PDE4CQ08493 712 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 TAF12Q16514 161 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 FAM78AQ5JUQ0 283 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 FKBP15Q5T1M5 1219 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 ENOSF1Q7L5Y1 443 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 NUP93Q8N1F7 819 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 ANKRD52Q8NB46 1076 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 LEMD2Q8NC56 503 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 ANKRD20A12PQ8NF67 263 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 ACSF2Q96CM8 615 aaPredicted RBP16.69■□□□□ 0.26
MBD1-207ENST00000398488 RSPRY1Q96DX4 576 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 ERGIC2Q96RQ1 377 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 SLC46A2Q9BY10 475 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 PLA2G2FQ9BZM2 168 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 MUTYHQ9UIF7 546 aa16.69■□□□□ 0.26
MBD1-207ENST00000398488 ZNF638Q14966 1978 aaKnown RBP16.68■□□□□ 0.26
MBD1-207ENST00000398488 PATJQ8NI35 1801 aa16.68■□□□□ 0.26
MBD1-207ENST00000398488 TAF10Q12962 218 aa16.68■□□□□ 0.26
MBD1-207ENST00000398488 HTR4Q13639 388 aa16.68■□□□□ 0.26
MBD1-207ENST00000398488 RAPGEF1Q13905 1077 aa16.68■□□□□ 0.26
MBD1-207ENST00000398488 NR1I3Q14994 352 aa16.68■□□□□ 0.26
MBD1-207ENST00000398488 CNGA2Q16280 664 aa16.68■□□□□ 0.26
MBD1-207ENST00000398488 GPR158Q5T848 1215 aa16.68■□□□□ 0.26
MBD1-207ENST00000398488 TXNDC8Q6A555 127 aa16.68■□□□□ 0.26
MBD1-207ENST00000398488 TANGO2Q6ICL3 276 aa16.68■□□□□ 0.26
MBD1-207ENST00000398488 LCLAT1Q6UWP7 414 aa16.68■□□□□ 0.26
MBD1-207ENST00000398488 FAM71AQ8IYT1 594 aa16.68■□□□□ 0.26
MBD1-207ENST00000398488 SLC22A12Q96S37 553 aa16.68■□□□□ 0.26
MBD1-207ENST00000398488 SMG9Q9H0W8 520 aaKnown RBP16.68■□□□□ 0.26
MBD1-207ENST00000398488 KCNK12Q9HB15 430 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms