RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 TBL3Q12788 808 aaKnown RBP11.48□□□□□ -0.57
HPS4-202ENST00000398145 TMTC4Q5T4D3 741 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 XRRA1Q6P2D8 792 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 C4orf50Q6ZRC1 276 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.48□□□□□ -0.57
HPS4-202ENST00000398145 LRRC57Q8N9N7 239 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 ERVK-5Q9HDB9 667 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 THAP1Q9NVV9 213 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 CCDC78A2IDD5 438 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 WFS1O76024 890 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 GSTT1P30711 240 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 RPL10AP62906 217 aaKnown RBP11.48□□□□□ -0.57
HPS4-202ENST00000398145 DSTYKQ6XUX3 929 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 C1orf186Q6ZWK4 172 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 UBA3Q8TBC4 463 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 ZNF606Q8WXB4 792 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 PTPRN2Q92932 1015 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 TLCD1Q96CP7 247 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 ACP6Q9NPH0 428 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 SLC39A10Q9ULF5 831 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 ABLIM1O14639 778 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 SNX2O60749 519 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 DEAF1O75398 565 aaPredicted RBP11.47□□□□□ -0.57
HPS4-202ENST00000398145 KRT36O76013 467 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 SRP72O76094 671 aaKnown RBP11.47□□□□□ -0.57
HPS4-202ENST00000398145 ZSCAN5DPP0CG00 497 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 VCAM1P19320 739 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 SERPINB10P48595 397 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 CCNA1P78396 465 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 ZNF268Q14587 947 aaPredicted RBP11.47□□□□□ -0.57
HPS4-202ENST00000398145 OASLQ15646 514 aaKnown RBP11.47□□□□□ -0.57
HPS4-202ENST00000398145 KYAT1Q16773 422 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 C3orf67Q6ZVT6 689 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 GDPD5Q8WTR4 605 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 CATSPER2Q96P56 530 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 KCNK4Q9NYG8 393 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 BLOC1S6Q9UL45 172 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 AP4S1Q9Y587 144 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 CNTNAP4Q9C0A0 1308 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 ARHGEF37A1IGU5 675 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 SDR42E2A6NKP2 422 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 KBTBD13C9JR72 458 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 E9PBE3 544 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 C2CD2LO14523 706 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 KLHL41O60662 606 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 EDF1O60869 148 aaKnown RBP11.47□□□□□ -0.57
HPS4-202ENST00000398145 CYP1A2P05177 515 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 TPI1P60174 286 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 ABCE1P61221 599 aaKnown RBP11.47□□□□□ -0.57
HPS4-202ENST00000398145 PLOD1Q02809 727 aaPredicted RBP11.47□□□□□ -0.57
HPS4-202ENST00000398145 FAAP100Q0VG06 881 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 LAYNQ6UX15 382 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 DPP9Q86TI2 863 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 C4orf19Q8IY42 314 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 FITM2Q8N6M3 262 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 POU5F2Q8N7G0 328 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 DDHD1Q8NEL9 900 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 CNDP1Q96KN2 507 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 NSMCE4AQ9NXX6 385 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 ADGRA3Q8IWK6 1321 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 ATP5BP06576 529 aaKnown RBP11.47□□□□□ -0.57
HPS4-202ENST00000398145 CPA3P15088 417 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 PTGER2P43116 358 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 PPATQ06203 517 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 WLSQ5T9L3 541 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 PDPK2PQ6A1A2 396 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 KCNV1Q6PIU1 500 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 FAM71AQ8IYT1 594 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 ZNF786Q8N393 782 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 FAM13CQ8NE31 585 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 MPP4Q96JB8 637 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 TNIP3Q96KP6 325 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 WRNIP1Q96S55 665 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 EPAS1Q99814 870 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 TMEM109Q9BVC6 243 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 TEX13BQ9BXU2 312 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 LRMDAQ9H2I8 198 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 ZNF408Q9H9D4 720 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 ZNF229Q9UJW7 825 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 MST1RQ04912 1400 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 DLG5Q8TDM6 1919 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 WTIPA6NIX2 430 aaPredicted RBP11.47□□□□□ -0.57
HPS4-202ENST00000398145 SHMT1P34896 483 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 FDFT1P37268 417 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 SEZ6Q53EL9 994 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 GPR141Q7Z602 305 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 TRABD2AQ86V40 505 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 EMC1Q8N766 993 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 TAAR1Q96RJ0 339 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 CISHQ9NSE2 258 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 USP18Q9UMW8 372 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 SNX13Q9Y5W8 968 aa11.47□□□□□ -0.57
HPS4-202ENST00000398145 NID2Q14112 1375 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 TRPC5OSA6NMA1 111 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 FAM58BPP0C7Q3 252 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 PDK2Q15119 407 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 GSTA3Q16772 222 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 SEL1L3Q68CR1 1132 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 ACER1Q8TDN7 264 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 SEPT1Q8WYJ6 367 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms