RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 RBM17Q96I25 401 aaKnown RBP2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 UIMC1Q96RL1 719 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 LBHD1Q9BQE6 289 aaPredicted RBP2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 BTBD2Q9BX70 525 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 MAK16Q9BXY0 300 aaKnown RBP2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 PACSIN1Q9BY11 444 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 EDEM3Q9BZQ6 932 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 TRIM5Q9C035 493 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 USP44Q9H0E7 712 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 C11orf54Q9H0W9 315 aaPredicted RBP2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 VPS16Q9H269 839 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 SMARCAD1Q9H4L7 1026 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 SPON1Q9HCB6 807 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 LRRC4CQ9HCJ2 640 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 ATP13A1Q9HD20 1204 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 ERVK-5Q9HDB9 667 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 G6PC2Q9NQR9 355 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 SEMA3GQ9NS98 782 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 ZSCAN32Q9NX65 697 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 TAB2Q9NYJ8 693 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 TAS2R10Q9NYW0 307 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 DTLQ9NZJ0 730 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 NDUFAF4Q9P032 175 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 CFAP97Q9P2B7 532 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 SAE1Q9UBE0 346 aaPredicted RBP2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 CNOT7Q9UIV1 285 aaKnown RBP2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 GTF3C4Q9UKN8 822 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 ACSL6Q9UKU0 697 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 CA14Q9ULX7 337 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 PA2G4Q9UQ80 394 aaKnown RBP2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 CLCA2Q9UQC9 943 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 PLEKHM1Q9Y4G2 1056 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 DTNAQ9Y4J8 743 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 ACTL7AQ9Y615 435 aa2.31□□□□□ -2.04
HMGN2P39-201ENST00000398005 A0A087WWL8 130 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 PNMA6EA0A0J9YXQ4 647 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 LOC102723971A0A1B0GUV8 181 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 ZC3H12DA2A288 527 aaKnown RBP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 ZNF839A8K0R7 811 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 A8MV72 311 aaPredicted RBP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 H0Y626 953 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 J3KTA2 159 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 M0QYG6 137 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 TAF4O00268 1085 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 MPHOSPH10O00566 681 aaKnown RBP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 UBE2CO00762 179 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 PSMA7O14818 248 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 KIAA0391O15091 583 aaKnown RBP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 DHX15O43143 795 aaKnown RBP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 TEX33O43247 280 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 HNRNPCL1O60812 293 aaKnown RBP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 ITGA10O75578 1167 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 CCNDBP1O95273 360 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 NTSR2O95665 410 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 VIPP01282 170 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 IGHDP01880 384 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 TFRCP02786 760 aaKnown RBP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 MT-ND3P03897 115 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 TUBB4AP04350 444 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 ATP5BP06576 529 aaKnown RBP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 CEACAM5P06731 702 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 SPARCP09486 303 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 UBL4AP11441 157 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 XRCC6P12956 609 aaKnown RBP eCLIP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 IL2RBP14784 551 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 ATF7P17544 494 aaPredicted RBP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 DESP17661 470 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 PRKCHP24723 683 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 YY1P25490 414 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 PSMA4P25789 261 aaKnown RBP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 NOS3P29474 1203 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 EEF1DP29692 281 aaKnown RBP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 PPARGP37231 505 aaPredicted RBP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 GLRBP48167 497 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 PTDSS1P48651 473 aaKnown RBP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 ANTXR2P58335 489 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 IL13RA1P78552 427 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 MRPS35P82673 323 aaKnown RBP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 CYP4F8P98187 520 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 AP1B1Q10567 949 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 GPS1Q13098 491 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 CAMK1Q14012 370 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 KCNAB1Q14722 419 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 GRM4Q14833 912 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 KIR3DS1Q14943 382 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 PTPN14Q15678 1187 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 TBCCQ15814 346 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 PKN2Q16513 984 aaKnown RBP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 INSCQ1MX18 579 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 MMEL1Q495T6 779 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 GALNTL6Q49A17 601 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 DUSP28Q4G0W2 176 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 PABPC1LQ4VXU2 614 aaKnown RBP2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 C19orf54Q5BKX5 351 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 TTC22Q5TAA0 569 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 DEPDC1Q5TB30 811 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 CACHD1Q5VU97 1274 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 NAA35Q5VZE5 725 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 KAZNQ674X7 775 aa2.3□□□□□ -2.04
HMGN2P39-201ENST00000398005 TRIM68Q6AZZ1 485 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms