RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 ZNF200P98182 395 aaPredicted RBP18.12■□□□□ 0.49
EWSR1-206ENST00000397938 ZYXQ15942 572 aaKnown RBP18.12■□□□□ 0.49
EWSR1-206ENST00000397938 IGDCC3Q8IVU1 814 aa18.12■□□□□ 0.49
EWSR1-206ENST00000397938 ZNF606Q8WXB4 792 aa18.12■□□□□ 0.49
EWSR1-206ENST00000397938 EZH1Q92800 747 aaPredicted RBP18.12■□□□□ 0.49
EWSR1-206ENST00000397938 CLPTM1LQ96KA5 538 aa18.12■□□□□ 0.49
EWSR1-206ENST00000397938 PPARGC1AQ9UBK2 798 aaKnown RBP18.12■□□□□ 0.49
EWSR1-206ENST00000397938 TCEAL9Q9UHQ7 104 aa18.12■□□□□ 0.49
EWSR1-206ENST00000397938 AGTPBP1Q9UPW5 1226 aa18.12■□□□□ 0.49
EWSR1-206ENST00000397938 EFR3BQ9Y2G0 817 aa18.12■□□□□ 0.49
EWSR1-206ENST00000397938 PPME1Q9Y570 386 aa18.12■□□□□ 0.49
EWSR1-206ENST00000397938 SLC4A7Q9Y6M7 1214 aa18.12■□□□□ 0.49
EWSR1-206ENST00000397938 SPECC1L-ADORA2AF8WAN1 911 aa18.12■□□□□ 0.49
EWSR1-206ENST00000397938 TBXAS1P24557 533 aaPredicted RBP18.12■□□□□ 0.49
EWSR1-206ENST00000397938 SFNP31947 248 aa18.12■□□□□ 0.49
EWSR1-206ENST00000397938 KBTBD12Q3ZCT8 623 aa18.12■□□□□ 0.49
EWSR1-206ENST00000397938 RASIP1Q5U651 963 aa18.12■□□□□ 0.49
EWSR1-206ENST00000397938 TTC13Q8NBP0 860 aa18.12■□□□□ 0.49
EWSR1-206ENST00000397938 IL1RAPL1Q9NZN1 696 aa18.12■□□□□ 0.49
EWSR1-206ENST00000397938 FEM1BQ9UK73 627 aa18.12■□□□□ 0.49
EWSR1-206ENST00000397938 I3L4J1 428 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 ICAM1P05362 532 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 ELK3P41970 407 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 NLRP11P59045 1033 aaKnown RBP18.11■□□□□ 0.49
EWSR1-206ENST00000397938 LIN52Q52LA3 116 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 MDH1BQ5I0G3 518 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 TMCO4Q5TGY1 634 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 POLNQ7Z5Q5 900 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 B4GALNT2Q8NHY0 566 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 CLEC4DQ8WXI8 215 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 PPP2R3CQ969Q6 453 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 DTNBP1Q96EV8 351 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 SRPK1Q96SB4 655 aaKnown RBP18.11■□□□□ 0.49
EWSR1-206ENST00000397938 THTPAQ9BU02 230 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 PPM1HQ9ULR3 514 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 TBC1D30Q9Y2I9 924 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 NUB1Q9Y5A7 615 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 ARID2Q68CP9 1835 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 COPEO14579 308 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 CST8O60676 142 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 ZNF132P52740 706 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 TAP1Q03518 808 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 CDHR3Q6ZTQ4 885 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 BBS12Q6ZW61 710 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 TTC1Q99614 292 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 CENPKQ9BS16 269 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 IQCGQ9H095 443 aaKnown RBP18.11■□□□□ 0.49
EWSR1-206ENST00000397938 WWP1Q9H0M0 922 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 VCX3BQ9H321 246 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 VCX3AQ9NNX9 186 aa18.11■□□□□ 0.49
EWSR1-206ENST00000397938 KBTBD13C9JR72 458 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 ERFP50548 548 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 KDSRQ06136 332 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 C1orf146Q5VVC0 180 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 TRIM42Q8IWZ5 723 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 CEP170P1Q96L14 293 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 STK32BQ9NY57 414 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 SPDYE2BA6NHP3 402 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 BUD23O43709 281 aaKnown RBP18.1■□□□□ 0.49
EWSR1-206ENST00000397938 USP1O94782 785 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 SPDYE6P0CI01 402 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 LIG4P49917 911 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 KRT76Q01546 638 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 BST1Q10588 318 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 SPDYE2Q495Y8 402 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 KYAT3Q6YP21 454 aaKnown RBP18.1■□□□□ 0.49
EWSR1-206ENST00000397938 PRPF39Q86UA1 669 aaKnown RBP18.1■□□□□ 0.49
EWSR1-206ENST00000397938 ARID3BQ8IVW6 561 aaPredicted RBP18.1■□□□□ 0.49
EWSR1-206ENST00000397938 UNC45BQ8IWX7 931 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 MTBPQ96DY7 904 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 ARHGAP28Q9P2N2 729 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 WDR81Q562E7 1941 aa18.1■□□□□ 0.49
EWSR1-206ENST00000397938 DCAF8L1A6NGE4 600 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 RNASEH1O60930 286 aaKnown RBP18.09■□□□□ 0.49
EWSR1-206ENST00000397938 FKBP6O75344 327 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 LSM8O95777 96 aaKnown RBP18.09■□□□□ 0.49
EWSR1-206ENST00000397938 BAG2O95816 211 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 STIP1P31948 543 aaKnown RBP18.09■□□□□ 0.49
EWSR1-206ENST00000397938 ACOT2P49753 483 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 BASP1P80723 227 aaKnown RBP18.09■□□□□ 0.49
EWSR1-206ENST00000397938 CDK18Q07002 472 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 HNRNPDQ14103 355 aaKnown RBP18.09■□□□□ 0.49
EWSR1-206ENST00000397938 ACAD11Q709F0 780 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 ADGRG6Q86SQ4 1221 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 MECRQ9BV79 373 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 CCDC106Q9BWC9 280 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 TEX264Q9Y6I9 313 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 ZNF541Q9H0D2 1346 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 SPAG6O75602 509 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 FAM155BO75949 473 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 NPR1P16066 1061 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 GHRHRQ02643 423 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 SLC25A11Q02978 314 aaKnown RBP18.09■□□□□ 0.49
EWSR1-206ENST00000397938 TBCCQ15814 346 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 ATG16L1Q676U5 607 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 UBR7Q8N806 425 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 OLFM3Q96PB7 478 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 HAPLN3Q96S86 360 aa18.09■□□□□ 0.49
EWSR1-206ENST00000397938 EIF2AK2P19525 551 aaKnown RBP18.08■□□□□ 0.49
EWSR1-206ENST00000397938 PTGER2P43116 358 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms