RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 MTO1Q9Y2Z2 717 aaKnown RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 TLR3O15455 904 aaKnown RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 TYROBPO43914 113 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 DHRS4L1P0CG22 281 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 TGFB3P10600 412 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 CHRM1P11229 460 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 ADSSP30520 456 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 STX1BP61266 288 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 AP1B1Q10567 949 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 ILF2Q12905 390 aaKnown RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 MTMR1Q13613 665 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 KPNB1Q14974 876 aaKnown RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 QPCTQ16769 361 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 BOLA3Q53S33 107 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 STXBP5Q5T5C0 1151 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 DARS2Q6PI48 645 aaKnown RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 CGRRF1Q99675 332 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 NIF3L1Q9GZT8 377 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 TCRBV5S1A1TA0A578 114 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 CYP26A1O43174 497 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 YWHABP31946 246 aaKnown RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 MLH1P40692 756 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 NAMPTP43490 491 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 SMAD1Q15797 465 aaKnown RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 TAF1BQ53T94 588 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 TMEM63BQ5T3F8 832 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 RNASEH2BQ5TBB1 312 aaKnown RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 CCDC125Q86Z20 511 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 THNSL1Q8IYQ7 743 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 FEZF2Q8TBJ5 459 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ACMSDQ8TDX5 336 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 NSL1Q96IY1 281 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 FAM118BQ9BPY3 351 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 TSSK1BQ9BXA7 367 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ZC4H2Q9NQZ6 224 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ABCF3Q9NUQ8 709 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 LTBP1Q14766 1721 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 APOC4-APOC2K7ER74 178 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 GNGT2O14610 69 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 MAGEC1O60732 1142 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 NPTXRO95502 500 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 APOC2P02655 101 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ARP10275 920 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 GSTT1P30711 240 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 SNX30Q5VWJ9 437 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ISLR2Q6UXK2 745 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ZFAND2BQ8WV99 257 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 SLC7A3Q8WY07 619 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 C8orf37Q96NL8 207 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 UNC45AQ9H3U1 944 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 CYP3A43Q9HB55 503 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 TAS2R14Q9NYV8 317 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 IL1RAPL1Q9NZN1 696 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 TTLL3Q9Y4R7 772 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 MYH8P13535 1937 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 NPHP3-ACAD11A0A0J9YXS1 232 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 DENND3A2RUS2 1198 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 A8MXQ7 604 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 DCDC2CA8MYV0 355 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 PI4K2BG5E9Z4 385 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 CLDN3O15551 220 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 SLC26A2P50443 739 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ZNF132P52740 706 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 RPL26P61254 145 aaKnown RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 KCNJ2P63252 427 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 DMPKQ09013 629 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 XKR9Q5GH70 373 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 SPICE1Q8N0Z3 855 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 UBR7Q8N806 425 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 RTP4Q96DX8 246 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 C7orf26Q96N11 449 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 WWP1Q9H0M0 922 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 AGO4Q9HCK5 861 aaKnown RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 STX18Q9P2W9 335 aaKnown RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ENDOD1O94919 500 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 RPS12P25398 132 aaKnown RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 MAP4P27816 1152 aaKnown RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 EPHB2P29323 1055 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 KYAT1Q16773 422 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 DNAL1Q4LDG9 190 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 DCAF15Q66K64 600 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ILDR2Q71H61 639 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 NT5DC4Q86YG4 428 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 NRBF2Q96F24 287 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ACAP3Q96P50 834 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 RSAD1Q9HA92 442 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 MRM3Q9HC36 420 aaKnown RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 CCPG1Q9ULG6 757 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 KRT38O76015 456 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 PSAPP07602 524 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ATP6V1C1P21283 382 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 DNAJB2P25686 324 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 KLRC2P26717 231 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ROR2Q01974 943 aaKnown RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 CUL2Q13617 745 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 MPP2Q14168 576 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 TRMT5Q32P41 509 aaKnown RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 CWF19L1Q69YN2 538 aaKnown RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ADGRD1Q6QNK2 874 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms