RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 EBF3Q9H4W6 596 aa25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 GINM1Q9NU53 330 aa25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 ACO1P21399 889 aaKnown RBP25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 BGNP21810 368 aa25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 BBS9Q3SYG4 887 aa25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 MDH1BQ5I0G3 518 aa25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 SCARA5Q6ZMJ2 495 aa25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 C3orf62Q6ZUJ4 267 aa25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 TTC17Q96AE7 1141 aa25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 POLR3FQ9H1D9 316 aaPredicted RBP25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 TBC1D30Q9Y2I9 924 aa25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 LPXNO60711 386 aa25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 TRMT5Q32P41 509 aaKnown RBP25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 SPOCD1Q6ZMY3 1216 aa25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 PYROXD1Q8WU10 500 aa25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 ALKBH8Q96BT7 664 aaKnown RBP25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 WNK4Q96J92 1243 aa25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 THTPAQ9BU02 230 aa25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 HAPLN2Q9GZV7 340 aa25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 PREBQ9HCU5 417 aa25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 TBC1D22BQ9NU19 505 aa25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 ZNF70Q9UC06 446 aaPredicted RBP25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 PPM1HQ9ULR3 514 aa25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 ACTR3P61158 418 aa25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 ARHGEF16Q5VV41 709 aa25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 TREML1Q86YW5 311 aa25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 XPNPEP1Q9NQW7 623 aa25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 AGTPBP1Q9UPW5 1226 aa25.07■■□□□ 1.6
CSNK1E-203ENST00000396832 OPHN1O60890 802 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 PENKP01210 267 aaPredicted RBP25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 GTF2H1P32780 548 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 PHBP35232 272 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 CCNFP41002 786 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 ZACNQ401N2 412 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 ULK2Q8IYT8 1036 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 STKLD1Q8NE28 680 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 WDR83Q9BRX9 315 aaKnown RBP25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 TJP2Q9UDY2 1190 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 SPDYE2BA6NHP3 402 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 A6NJR5 290 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 SPDYE6P0CI01 402 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 PLEKHA7Q6IQ23 1121 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 TMEM174Q8WUU8 243 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 FAM111AQ96PZ2 611 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 MRIQ9BWK5 157 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 SHOC2Q9UQ13 582 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 CHMP2BQ9UQN3 213 aa25.06■■□□□ 1.6
CSNK1E-203ENST00000396832 TM7SF2O76062 418 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 PTGER2P43116 358 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 KDSRQ06136 332 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 C1orf146Q5VVC0 180 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 SLC25A41Q8N5S1 370 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 FBXO36Q8NEA4 188 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 NAT14Q8WUY8 206 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 DHRS4Q9BTZ2 278 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 PARVAQ9NVD7 372 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 GALNT8Q9NY28 637 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 RBAKQ9NYW8 714 aaPredicted RBP25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 SLC7A8Q9UHI5 535 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 TMCO1Q9UM00 188 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 LRRIQ4A6NIV6 560 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 RAPH1Q70E73 1250 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 ENOSF1Q7L5Y1 443 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 LCA5Q86VQ0 697 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 FETUBQ9UGM5 382 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 AGO2Q9UKV8 859 aaKnown RBP25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 PLA2G4CQ9UP65 541 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 CAPN14A8MX76 684 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 MT-ND3P03897 115 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 MYBPC3Q14896 1274 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 FAM91A1Q658Y4 838 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 ATP11CQ8NB49 1132 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 DCAKDQ8WVC6 231 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 HIC2Q96JB3 615 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 DNAJB4Q9UDY4 337 aa25.05■■□□□ 1.6
CSNK1E-203ENST00000396832 LYPLA2O95372 231 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 C4BPAP04003 597 aaKnown RBP25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 PABPC4LP0CB38 370 aaKnown RBP25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 VCPP55072 806 aaKnown RBP25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 BASP1P80723 227 aaKnown RBP25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 DNAJC24Q6P3W2 148 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 C15orf39Q6ZRI6 1047 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 CHSY1Q86X52 802 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 ZNF606Q8WXB4 792 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 PDCD2LQ9BRP1 358 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 MIS12Q9H081 205 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 ETNK2Q9NVF9 386 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 SCINQ9Y6U3 715 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 E5RJQ4 531 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 NPM3O75607 178 aaKnown RBP25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 CD48P09326 243 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 DHRS4L1P0CG22 281 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 OTUD4Q01804 1114 aaKnown RBP25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 ORC1Q13415 861 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 LRRC36Q1X8D7 754 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 DRICH1Q6PGQ1 229 aaPredicted RBP25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 RASSF3Q86WH2 238 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 CCDC60Q8IWA6 550 aaPredicted RBP25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 TMEM130Q8N3G9 435 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 ACTL9Q8TC94 416 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms