RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 ADGRG2Q8IZP9 1017 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 GPD1LQ8N335 351 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 STKLD1Q8NE28 680 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 KCNV2Q8TDN2 545 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 SYT15Q9BQS2 421 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 PDE11AQ9HCR9 933 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 POLMQ9NP87 494 aaPredicted RBP18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 INTS13Q9NVM9 706 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 POLR3BQ9NW08 1133 aaPredicted RBP18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 SIX4Q9UIU6 781 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 A0A0A0MRY4 1105 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 FRMD3A2A2Y4 597 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 ZNF233A6NK53 670 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 LEFTY2O00292 366 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 TULP1O00294 542 aaPredicted RBP18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 TNFRSF10BO14763 440 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 WARSP23381 471 aaKnown RBP18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 HOXD12P35452 270 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 EOGTQ5NDL2 527 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 LPCAT2Q7L5N7 544 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 OSTM1Q86WC4 334 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 OLIG1Q8TAK6 271 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 MYCBPAPQ8TBZ2 947 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 WHAMMQ8TF30 809 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 C8orf48Q96LL4 319 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 PNKPQ96T60 521 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 MTMR12Q9C0I1 747 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 IKZF4Q9H2S9 585 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 UPF2Q9HAU5 1272 aaKnown RBP18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 TBC1D14Q9P2M4 693 aa18.7■□□□□ 0.58
EXOSC3-202ENST00000396521 DENND4CQ5VZ89 1909 aa18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 ZNF840PA6NDX5 716 aa18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 OLFM2O95897 454 aa18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 ADH1CP00326 375 aa18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 IDEP14735 1019 aa18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 BDNFP23560 247 aa18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 TNFRSF4P43489 277 aa18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 WNT7BP56706 349 aa18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 NUDT18Q6ZVK8 323 aa18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 OTUB2Q96DC9 234 aa18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 SLITRK1Q96PX8 696 aa18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 CBWD1Q9BRT8 395 aa18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 NUSAP1Q9BXS6 441 aaKnown RBP18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 LRRC27Q9C0I9 530 aa18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 SLC32A1Q9H598 525 aa18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 TBC1D7Q9P0N9 293 aa18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 MORC2Q9Y6X9 1032 aaPredicted RBP18.69■□□□□ 0.58
EXOSC3-202ENST00000396521 CDX4O14627 284 aaPredicted RBP18.68■□□□□ 0.58
EXOSC3-202ENST00000396521 MAP3K13O43283 966 aa18.68■□□□□ 0.58
EXOSC3-202ENST00000396521 APODP05090 189 aa18.68■□□□□ 0.58
EXOSC3-202ENST00000396521 P2RY2P41231 377 aa18.68■□□□□ 0.58
EXOSC3-202ENST00000396521 GRIA2P42262 883 aa18.68■□□□□ 0.58
EXOSC3-202ENST00000396521 DHPSP49366 369 aaPredicted RBP18.68■□□□□ 0.58
EXOSC3-202ENST00000396521 C8orf34Q49A92 452 aa18.68■□□□□ 0.58
EXOSC3-202ENST00000396521 TDRD10Q5VZ19 366 aaKnown RBP18.68■□□□□ 0.58
EXOSC3-202ENST00000396521 SYT12Q8IV01 421 aa18.68■□□□□ 0.58
EXOSC3-202ENST00000396521 WDR49Q8IV35 697 aa18.68■□□□□ 0.58
EXOSC3-202ENST00000396521 CCDC65Q8IXS2 484 aa18.68■□□□□ 0.58
EXOSC3-202ENST00000396521 MDGA1Q8NFP4 955 aa18.68■□□□□ 0.58
EXOSC3-202ENST00000396521 KBTBD7Q8WVZ9 684 aa18.68■□□□□ 0.58
EXOSC3-202ENST00000396521 MYLPFQ96A32 169 aa18.68■□□□□ 0.58
EXOSC3-202ENST00000396521 TPSD1Q9BZJ3 242 aa18.68■□□□□ 0.58
EXOSC3-202ENST00000396521 PANK4Q9NVE7 773 aa18.68■□□□□ 0.58
EXOSC3-202ENST00000396521 ANK1P16157 1881 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 GOLGA8IPA6NC78 632 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 GOLGA8JA6NMD2 632 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 ATP2C2O75185 946 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 TACC1O75410 805 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 CYP17A1P05093 508 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 LMO2P25791 158 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 IRX4P78413 519 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 CYP27A1Q02318 531 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 DHCR24Q15392 516 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 USP49Q70CQ1 688 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 TRMT11Q7Z4G4 463 aaKnown RBP18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 RABEPKQ7Z6M1 372 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 FILIP1Q7Z7B0 1213 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 CCDC33Q8N5R6 958 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 ZSWIM2Q8NEG5 633 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 PDZD8Q8NEN9 1154 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 OVCA2Q8WZ82 227 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 PIGKQ92643 395 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 PCED1BQ96HM7 432 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 MMS19Q96T76 1030 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 DUSP9Q99956 384 aaKnown RBP18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 ADAM33Q9BZ11 813 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 ELOVL4Q9GZR5 314 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 CRTAC1Q9NQ79 661 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 FBXO2Q9UK22 296 aaPredicted RBP18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 WASF3Q9UPY6 502 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 INVSQ9Y283 1065 aa18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 ZNF638Q14966 1978 aaKnown RBP18.67■□□□□ 0.58
EXOSC3-202ENST00000396521 ATRXP46100 2492 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 FRYQ5TBA9 3013 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 ATG2BQ96BY7 2078 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 E2F8A0AVK6 867 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 UPK3BL1B0FP48 263 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 UPK3BL2E5RIL1 263 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 KAT7O95251 611 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms