RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 PPP1R36Q96LQ0 422 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 NIFKQ9BYG3 293 aaKnown RBP9.74□□□□□ -0.85
NDE1-201ENST00000396354 C17orf75Q9HAS0 396 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 MRPL47Q9HD33 250 aaKnown RBP9.74□□□□□ -0.85
NDE1-201ENST00000396354 ATXN2Q99700 1313 aaKnown RBP9.74□□□□□ -0.85
NDE1-201ENST00000396354 CCDC78A2IDD5 438 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 B4GALT5O43286 388 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 LIASO43766 372 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 TJP3O95049 919 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 TMEM191BP0C7N4 346 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 GM2AP17900 193 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 BGNP21810 368 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 NUMBP49757 651 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 CYP1B1Q16678 543 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 CASC4Q6P4E1 433 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 RHBDF2Q6PJF5 856 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 SPOCD1Q6ZMY3 1216 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 NLRP9Q7RTR0 991 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 OTOAQ7RTW8 1153 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 UNC45BQ8IWX7 931 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 VPS52Q8N1B4 723 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 PTPRN2Q92932 1015 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 UTP4Q969X6 686 aaKnown RBP9.73□□□□□ -0.85
NDE1-201ENST00000396354 TBC1D10AQ9BXI6 508 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 OSBPL1AQ9BXW6 950 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 ROPN1BQ9BZX4 212 aaPredicted RBP9.73□□□□□ -0.85
NDE1-201ENST00000396354 IQCGQ9H095 443 aaKnown RBP9.73□□□□□ -0.85
NDE1-201ENST00000396354 MINDY3Q9H8M7 445 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 ROPN1Q9HAT0 212 aaPredicted RBP9.73□□□□□ -0.85
NDE1-201ENST00000396354 NGRNQ9NPE2 291 aaKnown RBP9.73□□□□□ -0.85
NDE1-201ENST00000396354 PARVAQ9NVD7 372 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 PPP2R3BQ9Y5P8 575 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 NUMBLQ9Y6R0 609 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 MSCO60682 206 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 BAG2O95816 211 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 GHRP10912 638 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 ALDH3A1P30838 453 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 GBP1P32455 592 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 PHKA2P46019 1235 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 TCEAL1Q15170 157 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 MTFR1Q15390 333 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 MUM1Q2TAK8 710 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 CENPUQ71F23 418 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 MCUR1Q96AQ8 359 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 CDHR1Q96JP9 859 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 MAGEB18Q96M61 343 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 SLITRK1Q96PX8 696 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 PAFAH2Q99487 392 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 ZNF408Q9H9D4 720 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 CISHQ9NSE2 258 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 SLC17A6Q9P2U8 582 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 HEY2Q9UBP5 337 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 XPO7Q9UIA9 1087 aaKnown RBP9.73□□□□□ -0.85
NDE1-201ENST00000396354 MYO18AQ92614 2054 aaKnown RBP9.73□□□□□ -0.85
NDE1-201ENST00000396354 PDE4DIPQ5VU43 2346 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 MTA2O94776 668 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 IL1R2P27930 398 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 SERPINB3P29508 390 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 CRADDP78560 199 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 GCNT1Q02742 428 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 ZNF252P-AS1Q0IIN9 211 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 CLUL1Q15846 466 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 C15orf59Q2T9L4 293 aaPredicted RBP9.73□□□□□ -0.85
NDE1-201ENST00000396354 PLEKHG4Q58EX7 1191 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 MFSD5Q6N075 450 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 DENND1BQ6P3S1 775 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 DARS2Q6PI48 645 aaKnown RBP9.73□□□□□ -0.85
NDE1-201ENST00000396354 BZW1Q7L1Q6 419 aaKnown RBP9.73□□□□□ -0.85
NDE1-201ENST00000396354 TRABD2AQ86V40 505 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 HACE1Q8IYU2 909 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 CDCA5Q96FF9 252 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 CLPTM1LQ96KA5 538 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 ACAP3Q96P50 834 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 GPR20Q99678 358 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 MAGEB5Q9BZ81 275 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 TRIM6Q9C030 488 aaPredicted RBP9.73□□□□□ -0.85
NDE1-201ENST00000396354 HMGXB4Q9UGU5 601 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 GGA2Q9UJY4 613 aa9.73□□□□□ -0.85
NDE1-201ENST00000396354 G3BP2Q9UN86 482 aaKnown RBP9.73□□□□□ -0.85
NDE1-201ENST00000396354 CYB561D2O14569 222 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 UNC5CO95185 931 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 PIGRP01833 764 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 APRTP07741 180 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 CYP2C8P10632 490 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 KRT3P12035 628 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 NAMPTP43490 491 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 STAT5BP51692 787 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 STAT4Q14765 748 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 CCNG2Q16589 344 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 ZNF699Q32M78 642 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 C3orf20Q8ND61 904 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.72□□□□□ -0.85
NDE1-201ENST00000396354 CCDC124Q96CT7 223 aaKnown RBP9.72□□□□□ -0.85
NDE1-201ENST00000396354 MIS12Q9H081 205 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 PACSIN3Q9UKS6 424 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 UGT1A9O60656 530 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 MT-ND3P03897 115 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 ENO1P06733 434 aaKnown RBP9.72□□□□□ -0.85
NDE1-201ENST00000396354 RBP3P10745 1247 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 GCAP28676 217 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms