RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 RASA2Q15283 850 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 GOLGA7BQ2TAP0 167 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 TRNP1Q6NT89 227 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 CENPUQ71F23 418 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 PPIL6Q8IXY8 311 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 LRRC34Q8IZ02 419 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 CYP4X1Q8N118 509 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 RXFP2Q8WXD0 754 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 MAML1Q92585 1016 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 PEBP4Q96S96 227 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 SLC4A5Q9BY07 1137 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 E5RJQ4 531 aa17.59■□□□□ 0.41
NUP50-202ENST00000396096 F2P00734 622 aa17.59■□□□□ 0.41
NUP50-202ENST00000396096 LIG3P49916 1009 aa17.59■□□□□ 0.41
NUP50-202ENST00000396096 SPRYD7Q5W111 196 aa17.59■□□□□ 0.41
NUP50-202ENST00000396096 CYP4F22Q6NT55 531 aa17.59■□□□□ 0.41
NUP50-202ENST00000396096 NOTUMQ6P988 496 aa17.59■□□□□ 0.41
NUP50-202ENST00000396096 ALKAL1Q6UXT8 129 aa17.59■□□□□ 0.41
NUP50-202ENST00000396096 UNC93AQ86WB7 457 aa17.59■□□□□ 0.41
NUP50-202ENST00000396096 RFX6Q8HWS3 928 aa17.59■□□□□ 0.41
NUP50-202ENST00000396096 USP6NLQ92738 828 aa17.59■□□□□ 0.41
NUP50-202ENST00000396096 ZMAT2Q96NC0 199 aaKnown RBP17.59■□□□□ 0.41
NUP50-202ENST00000396096 SLC5A4Q9NY91 659 aa17.59■□□□□ 0.41
NUP50-202ENST00000396096 SNTG2Q9NY99 539 aa17.59■□□□□ 0.41
NUP50-202ENST00000396096 CNTN3Q9P232 1028 aa17.59■□□□□ 0.41
NUP50-202ENST00000396096 CLEC11AQ9Y240 323 aa17.59■□□□□ 0.41
NUP50-202ENST00000396096 IFNB1P01574 187 aa17.58■□□□□ 0.41
NUP50-202ENST00000396096 CREB1P16220 341 aa17.58■□□□□ 0.41
NUP50-202ENST00000396096 GCAP28676 217 aa17.58■□□□□ 0.41
NUP50-202ENST00000396096 RDXP35241 583 aaKnown RBP17.58■□□□□ 0.41
NUP50-202ENST00000396096 GDF10P55107 478 aa17.58■□□□□ 0.41
NUP50-202ENST00000396096 MKRN3Q13064 507 aaKnown RBP17.58■□□□□ 0.41
NUP50-202ENST00000396096 ITIH4Q14624 930 aa17.58■□□□□ 0.41
NUP50-202ENST00000396096 TAF5Q15542 800 aa17.58■□□□□ 0.41
NUP50-202ENST00000396096 OR6B2Q6IFH4 312 aa17.58■□□□□ 0.41
NUP50-202ENST00000396096 CCDC121Q6ZUS5 278 aa17.58■□□□□ 0.41
NUP50-202ENST00000396096 CATSPER4Q7RTX7 472 aa17.58■□□□□ 0.41
NUP50-202ENST00000396096 TMEM110Q86TL2 294 aa17.58■□□□□ 0.41
NUP50-202ENST00000396096 NAT8LQ8N9F0 302 aa17.58■□□□□ 0.41
NUP50-202ENST00000396096 CCDC197Q8NCU1 140 aa17.58■□□□□ 0.41
NUP50-202ENST00000396096 BEST2Q8NFU1 509 aa17.58■□□□□ 0.41
NUP50-202ENST00000396096 STK32AQ8WU08 396 aa17.58■□□□□ 0.41
NUP50-202ENST00000396096 MRPL45Q9BRJ2 306 aaKnown RBP17.58■□□□□ 0.41
NUP50-202ENST00000396096 NSRP1Q9H0G5 558 aaKnown RBP17.58■□□□□ 0.41
NUP50-202ENST00000396096 SAE1Q9UBE0 346 aaPredicted RBP17.58■□□□□ 0.41
NUP50-202ENST00000396096 SMIM10L2AP0DMW4 78 aa17.58■□□□□ 0.4
NUP50-202ENST00000396096 SMIM10L2BP0DMW5 78 aa17.58■□□□□ 0.4
NUP50-202ENST00000396096 DARSP14868 501 aaKnown RBP17.58■□□□□ 0.4
NUP50-202ENST00000396096 BRAFP15056 766 aa17.58■□□□□ 0.4
NUP50-202ENST00000396096 PDGFRAP16234 1089 aa17.58■□□□□ 0.4
NUP50-202ENST00000396096 AXLP30530 894 aa17.58■□□□□ 0.4
NUP50-202ENST00000396096 RPL22P35268 128 aaKnown RBP17.58■□□□□ 0.4
NUP50-202ENST00000396096 CTCFP49711 727 aaPredicted RBP17.58■□□□□ 0.4
NUP50-202ENST00000396096 YARSP54577 528 aaKnown RBP17.58■□□□□ 0.4
NUP50-202ENST00000396096 LACTB2Q53H82 288 aaPredicted RBP17.58■□□□□ 0.4
NUP50-202ENST00000396096 PPP1R26Q5T8A7 1209 aaPredicted RBP17.58■□□□□ 0.4
NUP50-202ENST00000396096 ARHGAP17Q68EM7 881 aa17.58■□□□□ 0.4
NUP50-202ENST00000396096 OLFML1Q6UWY5 402 aa17.58■□□□□ 0.4
NUP50-202ENST00000396096 VSIG1Q86XK7 387 aa17.58■□□□□ 0.4
NUP50-202ENST00000396096 MICALL1Q8N3F8 863 aa17.58■□□□□ 0.4
NUP50-202ENST00000396096 RSAD2Q8WXG1 361 aa17.58■□□□□ 0.4
NUP50-202ENST00000396096 CPT1BQ92523 772 aa17.58■□□□□ 0.4
NUP50-202ENST00000396096 HSPH1Q92598 858 aa17.58■□□□□ 0.4
NUP50-202ENST00000396096 TSPAN18Q96SJ8 248 aa17.58■□□□□ 0.4
NUP50-202ENST00000396096 PTPN18Q99952 460 aa17.58■□□□□ 0.4
NUP50-202ENST00000396096 EIF2AQ9BY44 585 aaKnown RBP17.58■□□□□ 0.4
NUP50-202ENST00000396096 CXCL16Q9H2A7 254 aa17.58■□□□□ 0.4
NUP50-202ENST00000396096 ACTR5Q9H9F9 607 aaPredicted RBP17.58■□□□□ 0.4
NUP50-202ENST00000396096 UBN1Q9NPG3 1134 aa17.58■□□□□ 0.4
NUP50-202ENST00000396096 GNEQ9Y223 722 aaKnown RBP17.58■□□□□ 0.4
NUP50-202ENST00000396096 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.57■□□□□ 0.4
NUP50-202ENST00000396096 EXOC1LA0A1B0GW35 172 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 E7ESA3 106 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 PPEF2O14830 753 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 MCF2LO15068 1137 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 PSMC4P43686 418 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 SNX16P57768 344 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 EIF3EP60228 445 aaKnown RBP17.57■□□□□ 0.4
NUP50-202ENST00000396096 TFDP2Q14188 446 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 FASTKD3Q14CZ7 662 aaKnown RBP17.57■□□□□ 0.4
NUP50-202ENST00000396096 NOMO1Q15155 1222 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 HIF1AQ16665 826 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 FAM47CQ5HY64 1035 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 RNF187Q5TA31 235 aaPredicted RBP17.57■□□□□ 0.4
NUP50-202ENST00000396096 DPH6Q7L8W6 267 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 TTC30AQ86WT1 665 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 C12orf29Q8N999 325 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 SLC35F5Q8WV83 523 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 TEKT4Q8WW24 435 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 CKAP2Q8WWK9 683 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 KAT2BQ92831 832 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 NCAPGQ9BPX3 1015 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 FAM49AQ9H0Q0 323 aaPredicted RBP17.57■□□□□ 0.4
NUP50-202ENST00000396096 FETUBQ9UGM5 382 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 ZMYND8Q9ULU4 1186 aaPredicted RBP17.57■□□□□ 0.4
NUP50-202ENST00000396096 NME7Q9Y5B8 376 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 SNX9Q9Y5X1 595 aa17.57■□□□□ 0.4
NUP50-202ENST00000396096 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.57■□□□□ 0.4
NUP50-202ENST00000396096 ARL4CP56559 192 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 ADAM17P78536 824 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms