RNA–Protein interactions for RNA: ENST00000394828.6

PPP3CB-203, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-203ENST00000394828 CETN1Q12798 172 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 TAF1BQ53T94 588 aaPredicted RBP12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 CFAP157Q5JU67 520 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 C6orf118Q5T5N4 469 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 ZNF365Q70YC5 407 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 SATL1Q86VE3 508 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 JAMLQ86YT9 394 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 TPCN2Q8NHX9 752 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 LNX1Q8TBB1 728 aaPredicted RBP12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 CYTH2Q99418 400 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 ARHGAP39Q9C0H5 1083 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 PTPRHQ9HD43 1115 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 INIPQ9NRY2 104 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 DDX3XO00571 662 aaKnown RBP eCLIP12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 DYNC1LI2O43237 492 aaPredicted RBP12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 KCNJ1P48048 391 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 MAPK6Q16659 721 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 LIN52Q52LA3 116 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 SCARA3Q6AZY7 606 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 ZBTB33Q86T24 672 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 ZBTB8OSQ8IWT0 167 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 FBXL13Q8NEE6 735 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 SLC30A5Q8TAD4 765 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 HELQQ8TDG4 1101 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 PPP1R13LQ8WUF5 828 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 CKAP2Q8WWK9 683 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 LRRC37BQ96QE4 947 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 PPP1R16BQ96T49 567 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 APBA2Q99767 749 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 C2orf40Q9H1Z8 148 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 VCX3BQ9H321 246 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 GPBP1L1Q9HC44 474 aaPredicted RBP12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 VCX3AQ9NNX9 186 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 RBAKQ9NYW8 714 aaPredicted RBP12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 GRHL1Q9NZI5 618 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 CTTNBP2NLQ9P2B4 639 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 BRCA2P51587 3418 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 RNASEH1O60930 286 aaKnown RBP12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 TOM1L1O75674 476 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 C4BPAP04003 597 aaKnown RBP12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 VTNP04004 478 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 HARSP12081 509 aaKnown RBP12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 RGS2P41220 211 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 IRF5Q13568 498 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 GRIK4Q16099 956 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 TDRD10Q5VZ19 366 aaKnown RBP12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 TSHZ1Q6ZSZ6 1077 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 TLK2Q86UE8 772 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 SPATA24Q86W54 205 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 SLC35B4Q969S0 331 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 ERLEC1Q96DZ1 483 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 ANKRD27Q96NW4 1050 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 NFKBIZQ9BYH8 718 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 RAB20Q9NX57 234 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 STOML1Q9UBI4 398 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 NAGPAQ9UK23 515 aa12.42□□□□□ -0.42
PPP3CB-203ENST00000394828 TRIP12Q14669 1992 aaPredicted RBP12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 TMEM88BA6NKF7 163 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 CLDN3O15551 220 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 CSDE1O75534 798 aaKnown RBP12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 GSTA2P09210 222 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 TAC1P20366 129 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 ABCB4P21439 1286 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 CAP1Q01518 475 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 TFDP1Q14186 410 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 KIF22Q14807 665 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 PARP6Q2NL67 630 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 CYP4F22Q6NT55 531 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 C4orf50Q6ZRC1 276 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 SMC1BQ8NDV3 1235 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 SEC14L1Q92503 715 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 PI4K2AQ9BTU6 479 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 CADM1Q9BY67 442 aaKnown RBP12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 DCLRE1BQ9H816 532 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 TMCO1Q9UM00 188 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 O00370 1275 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 ACKR2O00590 384 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 TNPO2O14787 897 aaKnown RBP12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 MAGEB2O15479 319 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 CA12O43570 354 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 PGM3O95394 542 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 VNN1O95497 513 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 LDHAP00338 332 aaKnown RBP12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 ASLP04424 464 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 AMPD1P23109 780 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 GRM1Q13255 1194 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 HIC1Q14526 733 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 AMHR2Q16671 573 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 ZACNQ401N2 412 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 EIF1ADQ8N9N8 165 aaKnown RBP12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 SOCS4Q8WXH5 440 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 HHIPL1Q96JK4 782 aa12.41□□□□□ -0.42
PPP3CB-203ENST00000394828 A0A087WZ62 844 aa12.4□□□□□ -0.42
PPP3CB-203ENST00000394828 INO80B-WBP1J3KQ70 363 aa12.4□□□□□ -0.42
PPP3CB-203ENST00000394828 PDLIM1O00151 329 aa12.4□□□□□ -0.42
PPP3CB-203ENST00000394828 VARSP26640 1264 aaKnown RBP12.4□□□□□ -0.42
PPP3CB-203ENST00000394828 EEF1DP3Q658K8 133 aa12.4□□□□□ -0.42
PPP3CB-203ENST00000394828 IZUMO2Q6UXV1 221 aa12.4□□□□□ -0.42
PPP3CB-203ENST00000394828 USP37Q86T82 979 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms