RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 ACAP3Q96P50 834 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 NAA50Q9GZZ1 169 aaKnown RBP13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 WHRNQ9P202 907 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 A8MX80 341 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 ACADSBP45954 432 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 TRAPPC10P48553 1259 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 NLRP6P59044 892 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 UBE2UQ5VVX9 321 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 TMC5Q6UXY8 1006 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 DENND5BQ6ZUT9 1274 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 SETD3Q86TU7 594 aaPredicted RBP13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 ARID3BQ8IVW6 561 aaPredicted RBP13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 VGLL2Q8N8G2 317 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 ENAHQ8N8S7 591 aaPredicted RBP13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 BRSK1Q8TDC3 778 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 SNX29Q8TEQ0 813 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 ZSWIM1Q9BR11 485 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 COPS7BQ9H9Q2 264 aaPredicted RBP13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 CCDC177Q9NQR7 707 aaPredicted RBP13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 TXNDC16Q9P2K2 825 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 DIS3Q9Y2L1 958 aaKnown RBP13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 GOLGA8IPA6NC78 632 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 PIK3CDO00329 1044 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 KMOO15229 486 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 ITIH2P19823 946 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 IVDP26440 423 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 CPOXP36551 454 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 NPEPPSP55786 919 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 EIF3EP60228 445 aaKnown RBP13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 AMPD3Q01432 767 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 PDIA2Q13087 525 aaKnown RBP13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 NME3Q13232 169 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 DNASE1L3Q13609 305 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 SIX1Q15475 284 aaPredicted RBP13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 DSG4Q86SJ6 1040 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 RHOT2Q8IXI1 618 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 MIGA1Q8NAN2 632 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 OTUD5Q96G74 571 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 COQ7Q99807 217 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 TRIM56Q9BRZ2 755 aaKnown RBP13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 GPR108Q9NPR9 543 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 POMPQ9Y244 141 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 AFG3L2Q9Y4W6 797 aa13.05□□□□□ -0.32
SLC28A1-203ENST00000394573 GOLGA8CPA6NN73 597 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 ATP2A1O14983 1001 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 CLOCKO15516 846 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 DCCP43146 1447 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 STAT2P52630 851 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 KCNC4Q03721 635 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 SMU1Q2TAY7 513 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 LETM2Q2VYF4 491 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 GALNT18Q6P9A2 607 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 MON2Q7Z3U7 1717 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 ANKLE2Q86XL3 938 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 BLIDQ8IZY5 108 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 HCAR2Q8TDS4 363 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 EFHD2Q96C19 240 aaPredicted RBP13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 SOX13Q9UN79 622 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 ERGIC3Q9Y282 383 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 IFT52Q9Y366 437 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 LOC100653049A0A140TA62 436 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 TBKBP1A7MCY6 615 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 NMT2O60551 498 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 KRT34O76011 436 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 MLLT3P42568 568 aaPredicted RBP13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 RAB15P59190 212 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 KRT76Q01546 638 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 AARS2Q5JTZ9 985 aaKnown RBP13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 GPR107Q5VW38 600 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 KYAT3Q6YP21 454 aaKnown RBP13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 GPR141Q7Z602 305 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 CATIPQ7Z7H3 387 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 PQLC1Q8N2U9 271 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 CPSF7Q8N684 471 aaKnown RBP13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 TANKQ92844 425 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 LRGUKQ96M69 825 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 FAM111AQ96PZ2 611 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 HAUS8Q9BT25 410 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 ZHX3Q9H4I2 956 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 HDAC9Q9UKV0 1011 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 NENFQ9UMX5 172 aa13.04□□□□□ -0.32
SLC28A1-203ENST00000394573 CYP2D7A0A087X1C5 515 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 ZNF182P17025 639 aaPredicted RBP13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 POLR2EP19388 210 aaKnown RBP13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 GRM5P41594 1212 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 CASP7P55210 303 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 TRAF2Q12933 501 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 ZNF746Q6NUN9 644 aaPredicted RBP13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 IGFN1Q86VF2 1251 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 LRRC49Q8IUZ0 686 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 MAGEB6Q8N7X4 407 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 LRRC59Q96AG4 307 aaKnown RBP13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 MECRQ9BV79 373 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 WDR70Q9NW82 654 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 RNF11Q9Y3C5 154 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 SLIT1O75093 1534 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 CNTNAP5Q8WYK1 1306 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 CCDC88AQ3V6T2 1871 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 GSG1L2A8MUP6 293 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 ESRRBO95718 433 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms