RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 MROH9Q5TGP6 573 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 MAP7D3Q8IWC1 876 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 PDCD7Q8N8D1 485 aaKnown RBP11.02□□□□□ -0.65
ACTN1-203ENST00000394419 C12orf29Q8N999 325 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 CCDC110Q8TBZ0 833 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 RXFP2Q8WXD0 754 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 ASCC2Q9H1I8 757 aaPredicted RBP11.02□□□□□ -0.65
ACTN1-203ENST00000394419 SENP1Q9P0U3 644 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 HMGXB4Q9UGU5 601 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 SHOC2Q9UQ13 582 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 CHKBQ9Y259 395 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 ANKRD31Q8N7Z5 1873 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 TRIM49D1C9J1S8 452 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 ENTPD5O75356 428 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 ASMTLO95671 621 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 BAG6P46379 1132 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 TAP1Q03518 808 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 MGAT5Q09328 741 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 MXD4Q14582 209 aaPredicted RBP11.02□□□□□ -0.65
ACTN1-203ENST00000394419 RNASEH2BQ5TBB1 312 aaKnown RBP11.02□□□□□ -0.65
ACTN1-203ENST00000394419 OR6B3Q8NGW1 331 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 TRPM4Q8TD43 1214 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 CPT1BQ92523 772 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 ACO2Q99798 780 aaKnown RBP11.02□□□□□ -0.65
ACTN1-203ENST00000394419 FOXP3Q9BZS1 431 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 DHX35Q9H5Z1 703 aaKnown RBP11.02□□□□□ -0.65
ACTN1-203ENST00000394419 ZNF408Q9H9D4 720 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 HESX1Q9UBX0 185 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 SNX9Q9Y5X1 595 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 LY75O60449 1722 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 CNTNAP2Q9UHC6 1331 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 ALOX15BO15296 676 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 FARP2O94887 1054 aaPredicted RBP11.01□□□□□ -0.65
ACTN1-203ENST00000394419 BAG2O95816 211 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 PDGFRBP09619 1106 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 PTPN11Q06124 597 aaPredicted RBP11.01□□□□□ -0.65
ACTN1-203ENST00000394419 KDSRQ06136 332 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 SURF1Q15526 300 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 GLRA4Q5JXX5 417 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 MPZL3Q6UWV2 235 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 ARMC2Q8NEN0 867 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 HPDLQ96IR7 371 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 TBC1D10AQ9BXI6 508 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 TRIM6Q9C030 488 aaPredicted RBP11.01□□□□□ -0.65
ACTN1-203ENST00000394419 FBXO6Q9NRD1 293 aaPredicted RBP11.01□□□□□ -0.65
ACTN1-203ENST00000394419 ZC3H7BQ9UGR2 993 aaKnown RBP11.01□□□□□ -0.65
ACTN1-203ENST00000394419 MCM8Q9UJA3 840 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 C15orf41Q9Y2V0 281 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 MAFBQ9Y5Q3 323 aaPredicted RBP11.01□□□□□ -0.65
ACTN1-203ENST00000394419 ZNF831Q5JPB2 1677 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 A0A087WZ62 844 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 LACTBL1A8MY62 500 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 LSM8O95777 96 aaKnown RBP11.01□□□□□ -0.65
ACTN1-203ENST00000394419 STAG3L1P0CL83 205 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 GCKP35557 465 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 PDK4Q16654 411 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 SCUBE3Q8IX30 993 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 CCNYQ8ND76 341 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 RFWD2Q8NHY2 731 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 KIF12Q96FN5 646 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 ATXN7L3BQ96GX2 97 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 FDXACB1Q9BRP7 624 aaPredicted RBP11.01□□□□□ -0.65
ACTN1-203ENST00000394419 TXNDC16Q9P2K2 825 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 SUFUQ9UMX1 484 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 NFASCO94856 1347 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 MICAL2O94851 1124 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 TMEM63AO94886 807 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 ERBB2P04626 1255 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 EIF4BP23588 611 aaKnown RBP11.01□□□□□ -0.65
ACTN1-203ENST00000394419 AP3M2P53677 418 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 DPYSL3Q14195 570 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 RAB6CQ53S08 254 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 TMEM63BQ5T3F8 832 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 JADE1Q6IE81 842 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 ACOT1Q86TX2 421 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 NME8Q8N427 588 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 WDTC1Q8N5D0 677 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 MTMR14Q8NCE2 650 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 SPDL1Q96EA4 605 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 TWNKQ96RR1 684 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 CEP41Q9BYV8 373 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 RAB6CQ9H0N0 254 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 PDLIM7Q9NR12 457 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 PCMTD2Q9NV79 361 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 LGALS13Q9UHV8 139 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 FOCADQ5VW36 1801 aa11.01□□□□□ -0.65
ACTN1-203ENST00000394419 A6NJR5 290 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 E5RJQ4 531 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 EDF1O60869 148 aaKnown RBP11□□□□□ -0.65
ACTN1-203ENST00000394419 ADORA2BP29275 332 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 SERPINB3P29508 390 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 SDC4P31431 198 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 GPX6P59796 221 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 PTP4A2Q12974 167 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 TFDP2Q14188 446 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 LGSNQ5TDP6 509 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 CGB2Q6NT52 195 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 ZPBP2Q6X784 338 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 CFAP61Q8NHU2 1237 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 TTC8Q8TAM2 541 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms