RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 CDK7P50613 346 aa11.68□□□□□ -0.54
CUX1-204ENST00000393824 ADCY1Q08828 1119 aa11.68□□□□□ -0.54
CUX1-204ENST00000393824 PTK6Q13882 451 aa11.68□□□□□ -0.54
CUX1-204ENST00000393824 HS2ST1Q7LGA3 356 aa11.68□□□□□ -0.54
CUX1-204ENST00000393824 TLK2Q86UE8 772 aa11.68□□□□□ -0.54
CUX1-204ENST00000393824 SLC9A9Q8IVB4 645 aa11.68□□□□□ -0.54
CUX1-204ENST00000393824 KBTBD2Q8IY47 623 aa11.68□□□□□ -0.54
CUX1-204ENST00000393824 OR6J1Q8NGC5 347 aa11.68□□□□□ -0.54
CUX1-204ENST00000393824 LZICQ8WZA0 190 aa11.68□□□□□ -0.54
CUX1-204ENST00000393824 PTCD3Q96EY7 689 aaKnown RBP11.68□□□□□ -0.54
CUX1-204ENST00000393824 CENPKQ9BS16 269 aa11.68□□□□□ -0.54
CUX1-204ENST00000393824 PREBQ9HCU5 417 aa11.68□□□□□ -0.54
CUX1-204ENST00000393824 PDLIM7Q9NR12 457 aa11.68□□□□□ -0.54
CUX1-204ENST00000393824 METTL5Q9NRN9 209 aaKnown RBP11.68□□□□□ -0.54
CUX1-204ENST00000393824 SMG5Q9UPR3 1016 aaKnown RBP11.68□□□□□ -0.54
CUX1-204ENST00000393824 UMODL1Q5DID0 1318 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 CLIC2O15247 247 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 P4HA2O15460 535 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 PGK1P00558 417 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 PRKAR2AP13861 404 aaKnown RBP11.67□□□□□ -0.54
CUX1-204ENST00000393824 ITGA8P53708 1063 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 LAMC2Q13753 1193 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 HIC1Q14526 733 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 TARBP2Q15633 366 aaKnown RBP11.67□□□□□ -0.54
CUX1-204ENST00000393824 XKR3Q5GH77 459 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 IQSEC1Q6DN90 963 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 OTOAQ7RTW8 1153 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 MTDHQ86UE4 582 aaKnown RBP11.67□□□□□ -0.54
CUX1-204ENST00000393824 TDRPQ86YL5 185 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 EMID1Q96A84 441 aaPredicted RBP11.67□□□□□ -0.54
CUX1-204ENST00000393824 TMEM143Q96AN5 459 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 OLFM3Q96PB7 478 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 YIPF2Q9BWQ6 316 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 SENP1Q9P0U3 644 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 ASIC3Q9UHC3 531 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 FRMD4BQ9Y2L6 1034 aa11.67□□□□□ -0.54
CUX1-204ENST00000393824 FTLP02792 175 aaPredicted RBP11.66□□□□□ -0.54
CUX1-204ENST00000393824 PABPC4LP0CB38 370 aaKnown RBP11.66□□□□□ -0.54
CUX1-204ENST00000393824 GZMAP12544 262 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 MAN1A1P33908 653 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 SCNN1BP51168 640 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 MYCT1Q8N699 235 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 TMEM174Q8WUU8 243 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 STMN2Q93045 179 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 ZNF668Q96K58 619 aaPredicted RBP11.66□□□□□ -0.54
CUX1-204ENST00000393824 PLVAPQ9BX97 442 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 ANKEF1Q9NU02 776 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 GRID1Q9ULK0 1009 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 NUMBLQ9Y6R0 609 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 EMSYQ7Z589 1322 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 ZMYM2Q9UBW7 1377 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 TISP43B9A030 160 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 GYG2O15488 501 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 EXOC3O60645 756 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 FAM13AO94988 1023 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 MYCP01106 439 aaPredicted RBP11.66□□□□□ -0.54
CUX1-204ENST00000393824 UBTFL6P0CB48 400 aaPredicted RBP11.66□□□□□ -0.54
CUX1-204ENST00000393824 RTP1P59025 263 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 MYL7Q01449 175 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 MESDQ14696 234 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 PLEKHG4Q58EX7 1191 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 FAM102BQ5T8I3 360 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 PHLDB3Q6NSJ2 640 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 SYCP3Q8IZU3 236 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 LRRC71Q8N4P6 559 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 WDR60Q8WVS4 1066 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 NSL1Q96IY1 281 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 DDX50Q9BQ39 737 aaKnown RBP11.66□□□□□ -0.54
CUX1-204ENST00000393824 KCND2Q9NZV8 630 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 CIDEBQ9UHD4 219 aa11.66□□□□□ -0.54
CUX1-204ENST00000393824 A6NJR5 290 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 F8W8V4 182 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 ADCY3O60266 1144 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 FKTNO75072 461 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 HOXD8P13378 290 aaPredicted RBP11.65□□□□□ -0.54
CUX1-204ENST00000393824 IGBP1P78318 339 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 SGO2Q562F6 1265 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 ODR4Q5SWX8 454 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 FYB2Q5VWT5 728 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 ZNF365Q70YC5 407 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 HIC2Q96JB3 615 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 TUBGCP5Q96RT8 1024 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 NIFKQ9BYG3 293 aaKnown RBP11.65□□□□□ -0.54
CUX1-204ENST00000393824 DHX33Q9H6R0 707 aaKnown RBP11.65□□□□□ -0.54
CUX1-204ENST00000393824 PARVGQ9HBI0 331 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 SEPT11Q9NVA2 429 aaKnown RBP11.65□□□□□ -0.54
CUX1-204ENST00000393824 WBP1LQ9NX94 342 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 DNAJB4Q9UDY4 337 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 ANAPC5Q9UJX4 755 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 TMEM110-MUSTN1A8MSY1 372 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 DNAJC6O75061 913 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 SPAG7O75391 227 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 ZCCHC18P0CG32 403 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 PIM1P11309 404 aaPredicted RBP11.65□□□□□ -0.54
CUX1-204ENST00000393824 CRABP2P29373 138 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 RAP1GDS1P52306 607 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 CETN1Q12798 172 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 EMC2Q15006 297 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 TMED2Q15363 201 aa11.65□□□□□ -0.54
CUX1-204ENST00000393824 SH2D4BQ5SQS7 431 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms