RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 FBXO47Q5MNV8 452 aa13.13□□□□□ -0.31
CLTC-202ENST00000393043 EIF1ADQ8N9N8 165 aaKnown RBP13.13□□□□□ -0.31
CLTC-202ENST00000393043 MYCBPAPQ8TBZ2 947 aa13.13□□□□□ -0.31
CLTC-202ENST00000393043 RXFP2Q8WXD0 754 aa13.13□□□□□ -0.31
CLTC-202ENST00000393043 TMEM134Q9H6X4 195 aa13.13□□□□□ -0.31
CLTC-202ENST00000393043 ANGPT2O15123 496 aa13.13□□□□□ -0.31
CLTC-202ENST00000393043 IL10P22301 178 aa13.13□□□□□ -0.31
CLTC-202ENST00000393043 POLE2P56282 527 aa13.13□□□□□ -0.31
CLTC-202ENST00000393043 PDCD2Q16342 344 aaPredicted RBP13.13□□□□□ -0.31
CLTC-202ENST00000393043 IL17AQ16552 155 aa13.13□□□□□ -0.31
CLTC-202ENST00000393043 AMHR2Q16671 573 aa13.13□□□□□ -0.31
CLTC-202ENST00000393043 TDRD10Q5VZ19 366 aaKnown RBP13.13□□□□□ -0.31
CLTC-202ENST00000393043 LONP2Q86WA8 852 aa13.13□□□□□ -0.31
CLTC-202ENST00000393043 SLC9A9Q8IVB4 645 aa13.13□□□□□ -0.31
CLTC-202ENST00000393043 MAGEB18Q96M61 343 aa13.13□□□□□ -0.31
CLTC-202ENST00000393043 ASPSCR1Q9BZE9 553 aa13.13□□□□□ -0.31
CLTC-202ENST00000393043 SHOC2Q9UQ13 582 aa13.13□□□□□ -0.31
CLTC-202ENST00000393043 UBIAD1Q9Y5Z9 338 aa13.13□□□□□ -0.31
CLTC-202ENST00000393043 GLRA3O75311 464 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 THP07101 528 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 PTPRAP18433 802 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 CAPRIN1Q14444 709 aaKnown RBP13.12□□□□□ -0.31
CLTC-202ENST00000393043 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLTC-202ENST00000393043 RABGAP1LQ5R372 815 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 MROH9Q5TGP6 573 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 POTEAQ6S8J7 498 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 SPATA20Q8TB22 786 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 APBB2Q92870 758 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 MARCOQ9UEW3 520 aaPredicted RBP13.12□□□□□ -0.31
CLTC-202ENST00000393043 AP4E1Q9UPM8 1137 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 ESRRBO95718 433 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 CNTFP26441 200 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 RAP1GAPP47736 663 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 VCPP55072 806 aaKnown RBP13.12□□□□□ -0.31
CLTC-202ENST00000393043 GTF2BQ00403 316 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 PCSK7Q16549 785 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 C16orf89Q6UX73 402 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 ZNF410Q86VK4 478 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 LCA5Q86VQ0 697 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 LRRC34Q8IZ02 419 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 MRPL1Q9BYD6 325 aaKnown RBP13.12□□□□□ -0.31
CLTC-202ENST00000393043 MUC3BQ9H195 1237 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 TRPC7Q9HCX4 862 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 VPS9D1Q9Y2B5 631 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 PCDHB7Q9Y5E2 793 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 PIK3C2AO00443 1686 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 PRRG1O14668 218 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 HIST1H2AGP0C0S8 130 aaPredicted RBP13.12□□□□□ -0.31
CLTC-202ENST00000393043 HIST1H2ADP20671 130 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 LBRQ14739 615 aaKnown RBP13.12□□□□□ -0.31
CLTC-202ENST00000393043 GRIK4Q16099 956 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 CBWD6Q4V339 395 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 CBWD3Q5JTY5 395 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 MIIPQ5JXC2 388 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 CBWD5Q5RIA9 395 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 C10orf120Q5SQS8 335 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 TIGD7Q6NT04 549 aaPredicted RBP13.12□□□□□ -0.31
CLTC-202ENST00000393043 HIST1H2AHQ96KK5 128 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 P2RX7Q99572 595 aaKnown RBP13.12□□□□□ -0.31
CLTC-202ENST00000393043 HIST1H2AJQ99878 128 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 H2AFJQ9BTM1 129 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 DCLK3Q9C098 648 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 MRPL46Q9H2W6 279 aaKnown RBP13.12□□□□□ -0.31
CLTC-202ENST00000393043 YY1AP1Q9H869 796 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.12□□□□□ -0.31
CLTC-202ENST00000393043 KDM4FA0A1W2PPD8 638 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 TOMM70O94826 608 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 TGM2P21980 687 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 HMOX2P30519 316 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 AXLP30530 894 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 CHI3L2Q15782 390 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 NUDT18Q6ZVK8 323 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 CREG2Q8IUH2 290 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 TNFRSF25Q93038 417 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 PORCNQ9H237 461 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 DYRK4Q9NR20 520 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 CDYLQ9Y232 598 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 RPS6KL1Q9Y6S9 549 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 CASZ1Q86V15 1759 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 PLA2G6O60733 806 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 CAND2O75155 1236 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 DDX5P17844 614 aaKnown RBP13.12□□□□□ -0.31
CLTC-202ENST00000393043 DNAJC3Q13217 504 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 AP1ARQ63HQ0 302 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 LRRC8EQ6NSJ5 796 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 ACTL9Q8TC94 416 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 PBXIP1Q96AQ6 731 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 ING2Q9H160 280 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 ABI2Q9NYB9 513 aaPredicted RBP13.12□□□□□ -0.31
CLTC-202ENST00000393043 DCDC2Q9UHG0 476 aa13.12□□□□□ -0.31
CLTC-202ENST00000393043 BAZ2BQ9UIF8 2168 aaKnown RBP13.11□□□□□ -0.31
CLTC-202ENST00000393043 NCAM2O15394 837 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 EIF4BP23588 611 aaKnown RBP13.11□□□□□ -0.31
CLTC-202ENST00000393043 CCND1P24385 295 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 CORO7P57737 925 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 MTM1Q13496 603 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 ACAP1Q15027 740 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 TATDN1Q6P1N9 297 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 EFL1Q7Z2Z2 1120 aaKnown RBP13.11□□□□□ -0.31
CLTC-202ENST00000393043 PCSK9Q8NBP7 692 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms