RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 SMARCB1Q12824 385 aa12.68□□□□□ -0.38
SOD1-202ENST00000389995 DTHD1Q6ZMT9 781 aa12.68□□□□□ -0.38
SOD1-202ENST00000389995 FILIP1Q7Z7B0 1213 aa12.68□□□□□ -0.38
SOD1-202ENST00000389995 SCN4BQ8IWT1 228 aa12.68□□□□□ -0.38
SOD1-202ENST00000389995 CD302Q8IX05 232 aa12.68□□□□□ -0.38
SOD1-202ENST00000389995 PDCL2Q8N4E4 241 aa12.68□□□□□ -0.38
SOD1-202ENST00000389995 MDM1Q8TC05 714 aa12.68□□□□□ -0.38
SOD1-202ENST00000389995 TRMT2BQ96GJ1 504 aaKnown RBP12.68□□□□□ -0.38
SOD1-202ENST00000389995 SPACA7Q96KW9 195 aa12.68□□□□□ -0.38
SOD1-202ENST00000389995 MYRFLQ96LU7 910 aa12.68□□□□□ -0.38
SOD1-202ENST00000389995 REEP2Q9BRK0 252 aa12.68□□□□□ -0.38
SOD1-202ENST00000389995 DDX43Q9NXZ2 648 aaKnown RBP12.68□□□□□ -0.38
SOD1-202ENST00000389995 SLC6A14Q9UN76 642 aa12.68□□□□□ -0.38
SOD1-202ENST00000389995 STK24Q9Y6E0 443 aa12.68□□□□□ -0.38
SOD1-202ENST00000389995 CFAP46Q8IYW2 2715 aa12.68□□□□□ -0.38
SOD1-202ENST00000389995 MAST4O15021 2626 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 UPK3BL1B0FP48 263 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 UPK3BL2E5RIL1 263 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 LEFTY2O00292 366 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 SH3BP5O60239 455 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 PIGRP01833 764 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 TRAPPC10P48553 1259 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 RPL10AP62906 217 aaKnown RBP12.67□□□□□ -0.38
SOD1-202ENST00000389995 MRPS21P82921 87 aaKnown RBP12.67□□□□□ -0.38
SOD1-202ENST00000389995 ATP2C1P98194 919 aaPredicted RBP12.67□□□□□ -0.38
SOD1-202ENST00000389995 RPL6Q02878 288 aaKnown RBP12.67□□□□□ -0.38
SOD1-202ENST00000389995 GFPT1Q06210 699 aaPredicted RBP12.67□□□□□ -0.38
SOD1-202ENST00000389995 KCNB1Q14721 858 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 SV2CQ496J9 727 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 ADALQ6DHV7 355 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 OSTM1Q86WC4 334 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 MYCT1Q8N699 235 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 FBXO18Q8NFZ0 1043 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 LRIG1Q96JA1 1093 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 TSPAN18Q96SJ8 248 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 PKMYT1Q99640 499 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 CCSER1Q9C0I3 900 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 ZHX3Q9H4I2 956 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 CAPN10Q9HC96 672 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 SMPD4Q9NXE4 827 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 LARSQ9P2J5 1176 aaKnown RBP12.67□□□□□ -0.38
SOD1-202ENST00000389995 UXTQ9UBK9 157 aaPredicted RBP12.67□□□□□ -0.38
SOD1-202ENST00000389995 KCNG1Q9UIX4 513 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 L1RE1Q9UN81 338 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 RAXQ9Y2V3 346 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 DERAQ9Y315 318 aa12.67□□□□□ -0.38
SOD1-202ENST00000389995 H0Y626 953 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 ATP2C2O75185 946 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 KAT7O95251 611 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 TRIM16O95361 564 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 PAX3P23760 479 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 RDXP35241 583 aaKnown RBP12.66□□□□□ -0.38
SOD1-202ENST00000389995 WASP42768 502 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 KIR2DL1P43626 348 aaPredicted RBP12.66□□□□□ -0.38
SOD1-202ENST00000389995 USP46P62068 366 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 DHCR24Q15392 516 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 TRIP6Q15654 476 aaKnown RBP12.66□□□□□ -0.38
SOD1-202ENST00000389995 NFE2Q16621 373 aaPredicted RBP12.66□□□□□ -0.38
SOD1-202ENST00000389995 DUOXA1Q1HG43 343 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 INTS6LQ5JSJ4 861 aaKnown RBP12.66□□□□□ -0.38
SOD1-202ENST00000389995 PEAR1Q5VY43 1037 aaPredicted RBP12.66□□□□□ -0.38
SOD1-202ENST00000389995 CRELD2Q6UXH1 353 aaPredicted RBP12.66□□□□□ -0.38
SOD1-202ENST00000389995 MARCH9Q86YJ5 346 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 ADGRG2Q8IZP9 1017 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 ZSWIM2Q8NEG5 633 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 CCDC26Q8TAB7 109 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 PNKPQ96T60 521 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 RNF38Q9H0F5 515 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 CCDC86Q9H6F5 360 aaKnown RBP12.66□□□□□ -0.38
SOD1-202ENST00000389995 POLMQ9NP87 494 aaPredicted RBP12.66□□□□□ -0.38
SOD1-202ENST00000389995 ARHGAP26Q9UNA1 814 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 C2CD2Q9Y426 696 aa12.66□□□□□ -0.38
SOD1-202ENST00000389995 TP53BP1Q12888 1972 aaPredicted RBP12.66□□□□□ -0.38
SOD1-202ENST00000389995 MYMKA6NI61 221 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 H0YCG3 227 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 FAM13AO94988 1023 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 APODP05090 189 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 ITGB3P05106 788 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 SERPINF2P08697 491 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 FTH1P19P0C7X4 201 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 POLR2BP30876 1174 aaKnown RBP12.65□□□□□ -0.38
SOD1-202ENST00000389995 ANAPC15P60006 121 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 ZNF33AQ06730 810 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 ZNF423Q2M1K9 1284 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 HYIQ5T013 277 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 RHBDF2Q6PJF5 856 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 GPBP1Q86WP2 473 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 SPATA2LQ8IUW3 424 aaPredicted RBP12.65□□□□□ -0.38
SOD1-202ENST00000389995 SLC41A1Q8IVJ1 513 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 SPATA18Q8TC71 538 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 LEO1Q8WVC0 666 aaPredicted RBP12.65□□□□□ -0.38
SOD1-202ENST00000389995 CRELD1Q96HD1 420 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 ACBD6Q9BR61 282 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 ASB7Q9H672 318 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 CD93Q9NPY3 652 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 ARHGEF4Q9NR80 690 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 AGO2Q9UKV8 859 aaKnown RBP12.65□□□□□ -0.38
SOD1-202ENST00000389995 AGAP1Q9UPQ3 857 aa12.65□□□□□ -0.38
SOD1-202ENST00000389995 NUMA1Q14980 2115 aa12.64□□□□□ -0.39
SOD1-202ENST00000389995 NAV2Q8IVL1 2488 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms