RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 NT5C1B-RDH14C9J2C7 533 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 ZMYND10O75800 440 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 CYP11A1P05108 521 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 SETSIPP0DME0 302 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 CACNA2D1P54289 1103 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 RWDD2BP57060 319 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 MAP3K7CLP57077 242 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 TAP1Q03518 808 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 LONRF2Q1L5Z9 754 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 RAB6CQ53S08 254 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 OVOS1Q6IE37 1185 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 TMCO3Q6UWJ1 677 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 OLFML1Q6UWY5 402 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 METTL23Q86XA0 190 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 KLHL7Q8IXQ5 586 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 ARFGAP1Q8N6T3 406 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 ANKLE1Q8NAG6 615 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 OR10T2Q8NGX3 314 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 NDRG1Q92597 394 aaKnown RBP12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 TRIM43Q96BQ3 446 aaPredicted RBP12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 ZBTB9Q96C00 473 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 ACSF2Q96CM8 615 aaPredicted RBP12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 KRT12Q99456 494 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 DUSP16Q9BY84 665 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 DNAI2Q9GZS0 605 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 RAB6CQ9H0N0 254 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 KRT82Q9NSB4 513 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 TMLHEQ9NVH6 421 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 ARGLU1Q9NWB6 273 aaPredicted RBP12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 CDH9Q9ULB4 789 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 TCRBV7S2A1N4TA0A589 114 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 KRIT1O00522 736 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 NRP1O14786 923 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 FLT3P36888 993 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 SLC7A5Q01650 507 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 SH3PXD2AQ5TCZ1 1133 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 CLEC20AQ6ZU45 233 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 PIGZQ86VD9 579 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 LRRTM3Q86VH5 581 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 NPAS4Q8IUM7 802 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 MMGT1Q8N4V1 131 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 B3GALT6Q96L58 329 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 KCNK16Q96T55 309 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 TMEM106CQ9BVX2 250 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 TMEM59LQ9UK28 342 aa12.83□□□□□ -0.36
SPTBN1-203ENST00000389980 TADA2AO75478 443 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 OR4Q2P0C623 313 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 NPR3P17342 541 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 PCSK1P29120 753 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 MAN1A1P33908 653 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 PLA2G4AP47712 749 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 SLC11A1P49279 550 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 NDUFV1P49821 464 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 SLC6A3Q01959 620 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 ITIH3Q06033 890 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 PIGHQ14442 188 aaPredicted RBP12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 SEL1L2Q5TEA6 688 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 NECAB2Q7Z6G3 386 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 FAM35AQ86V20 835 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 ZDHHC14Q8IZN3 488 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 MYCBPAPQ8TBZ2 947 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 STK32AQ8WU08 396 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 KHSRPQ92945 711 aaKnown RBP eCLIP12.82□□□□□ -0.362e-6■□□□□ 8.6
SPTBN1-203ENST00000389980 MYLPFQ96A32 169 aa12.82□□□□□ -0.36
SPTBN1-203ENST00000389980 XPO1O14980 1071 aaKnown RBP12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 AP1G2O75843 785 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 PARNO95453 639 aaKnown RBP12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 FAM200BP0CF97 657 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 CSF2RAP15509 400 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 PLCB3Q01970 1234 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 ADIGQ0VDE8 80 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 IKBKEQ14164 716 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 CDO1Q16878 200 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 C15orf59Q2T9L4 293 aaPredicted RBP12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 INTS6LQ5JSJ4 861 aaKnown RBP12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 FAM117BQ6P1L5 589 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 ANKS1BQ7Z6G8 1248 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 TMEM173Q86WV6 379 aaPredicted RBP12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 RHOT1Q8IXI2 618 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 RXFP2Q8WXD0 754 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 CFAP57Q96MR6 1250 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 SMOQ99835 787 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 ACBD6Q9BR61 282 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 DDX47Q9H0S4 455 aaKnown RBP12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 DSEQ9UL01 958 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 TTC7AQ9ULT0 858 aaPredicted RBP12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 PCDHB8Q9UN66 801 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 C2CD4BA6NLJ0 364 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 PI4K2BG5E9Z4 385 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 LRCH4O75427 683 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 ACRP10323 421 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 PDGFRAP16234 1089 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 BDNFP23560 247 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 YWHAHQ04917 246 aaPredicted RBP12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 SMTNL2Q2TAL5 461 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 ZFYVE27Q5T4F4 411 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 CNKSR3Q6P9H4 555 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 GPRIN1Q7Z2K8 1008 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 CEP57Q86XR8 500 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 CCDC50Q8IVM0 306 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms