RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 HIF1AQ16665 826 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 SPDYCQ5MJ68 293 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 ATF7IP2Q5U623 682 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 RGMBQ6NW40 437 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 DARS2Q6PI48 645 aaKnown RBP12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 KATNAL2Q8IYT4 538 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 ACO2Q99798 780 aaKnown RBP12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 SETD4Q9NVD3 440 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 FAM47DPA6NHR8 397 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 LIASO43766 372 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 CTCFP49711 727 aaPredicted RBP12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 KCNJ2P63252 427 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 TNFAIP2Q03169 654 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 DUSP28Q4G0W2 176 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 VSTM1Q6UX27 236 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 SYDE1Q6ZW31 735 aaPredicted RBP12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 BRSK2Q8IWQ3 736 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 C12orf50Q8NA57 414 aaPredicted RBP12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 CPB2Q96IY4 423 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 YIPF3Q9GZM5 350 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 CHMP2BQ9UQN3 213 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 L3MBTL1Q9Y468 752 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 KLHL33A6NCF5 533 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 BHMG1C9JSJ3 638 aaPredicted RBP12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 ASS1P00966 412 aaKnown RBP12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 CD48P09326 243 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 IVDP26440 423 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 ZBTB16Q05516 673 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 TAF5Q15542 800 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 TFDP3Q5H9I0 405 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 BSPRYQ5W0U4 402 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 PLEKHA7Q6IQ23 1121 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 PPP1R21Q6ZMI0 780 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 C3orf62Q6ZUJ4 267 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 SPDYE1Q8NFV5 336 aaPredicted RBP12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 CENPTQ96BT3 561 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 ADPGKQ9BRR6 497 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 SPATS2LQ9NUQ6 558 aaKnown RBP12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 ABT1Q9ULW3 272 aaKnown RBP12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 ADGRA2Q96PE1 1338 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 SYNJ2BP-COX16A0A087WUM0 186 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 ASAP2O43150 1006 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 PYGLP06737 847 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 EFNA5P52803 228 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 CDH6P55285 790 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 TFDP1Q14186 410 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 KRT81Q14533 505 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 EFTUD2Q15029 972 aaKnown RBP eCLIP12.66□□□□□ -0.384e-6■■■■■ 28.2
CAPRIN1-202ENST00000389645 C3orf20Q8ND61 904 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 PRCCQ92733 491 aaPredicted RBP12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 FAM49AQ9H0Q0 323 aaPredicted RBP12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 IFT122Q9HBG6 1241 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 ETNK1Q9HBU6 452 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 GPATCH2LQ9NWQ4 482 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 COX16Q9P0S2 106 aa12.66□□□□□ -0.38
CAPRIN1-202ENST00000389645 RBM47A0AV96 593 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 TMEM191CA6NGB0 347 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 PIGRP01833 764 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 MMP3P08254 477 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 KRT4P19013 534 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 SLC26A2P50443 739 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 OVGP1Q12889 678 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 OLFML2BQ68BL8 750 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 C15orf39Q6ZRI6 1047 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 SESTD1Q86VW0 696 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 PHF13Q86YI8 300 aaPredicted RBP12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 IFNL1Q8IU54 200 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 ETAA1Q9NY74 926 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 CNTNAP2Q9UHC6 1331 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 A0A1W2PPM1 405 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 C5orf60A6NFR6 353 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 SLC15A5A6NIM6 579 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 DNALI1O14645 258 aaPredicted RBP12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 MCF2LO15068 1137 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 RBP3P10745 1247 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 EIF3EP60228 445 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 BEX3Q00994 111 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 PTPN20Q4JDL3 420 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 ZC3H12AQ5D1E8 599 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 ZNF467Q7Z7K2 595 aaPredicted RBP12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 SPATA18Q8TC71 538 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 FBF1Q8TES7 1133 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 NLRP7Q8WX94 980 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 ERP27Q96DN0 273 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 CFAP36Q96G28 342 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 MIS12Q9H081 205 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 IQCGQ9H095 443 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 KDM4CQ9H3R0 1056 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 SMYD3Q9H7B4 428 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 AGAP1Q9UPQ3 857 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 ARL2BPQ9Y2Y0 163 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 CTGFP29279 349 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 MSH2P43246 934 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 ERFP50548 548 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 YARSP54577 528 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 MAP2K5Q13163 448 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 CRHR2Q13324 411 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 PIGHQ14442 188 aaPredicted RBP12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 SPARCL1Q14515 664 aa12.65□□□□□ -0.38
CAPRIN1-202ENST00000389645 AMHR2Q16671 573 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms