RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 PROCP04070 461 aa14.83□□□□□ -0.03
RTF1-201ENST00000389629 FESP07332 822 aa14.83□□□□□ -0.03
RTF1-201ENST00000389629 ANPEPP15144 967 aa14.83□□□□□ -0.03
RTF1-201ENST00000389629 RARRES1P49788 294 aa14.83□□□□□ -0.03
RTF1-201ENST00000389629 CYP24A1Q07973 514 aa14.83□□□□□ -0.03
RTF1-201ENST00000389629 RNF135Q8IUD6 432 aa14.83□□□□□ -0.03
RTF1-201ENST00000389629 KIF1AQ12756 1690 aa14.83□□□□□ -0.03
RTF1-201ENST00000389629 CYP1A2P05177 515 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 SRGAP2BP0DMP2 458 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 SDC4P31431 198 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 CIITAP33076 1130 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 PTGIRP43119 386 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 ACAP1Q15027 740 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 ATP13A4Q4VNC1 1196 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 SNRNP48Q6IEG0 339 aaKnown RBP14.83□□□□□ -0.04
RTF1-201ENST00000389629 C4orf50Q6ZRC1 276 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 CCDC33Q8N5R6 958 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 SIX2Q9NPC8 291 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 ZNF302Q9NR11 478 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 FSCN2O14926 492 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 SERPINB8P50452 374 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 FAAP100Q0VG06 881 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 TBL3Q12788 808 aaKnown RBP14.83□□□□□ -0.04
RTF1-201ENST00000389629 CLNKQ7Z7G1 428 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 ZNF786Q8N393 782 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 NSUN6Q8TEA1 469 aaKnown RBP14.83□□□□□ -0.04
RTF1-201ENST00000389629 PSMC3P17980 439 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 VCPP55072 806 aaKnown RBP14.83□□□□□ -0.04
RTF1-201ENST00000389629 PLOD1Q02809 727 aaPredicted RBP14.83□□□□□ -0.04
RTF1-201ENST00000389629 TKFCQ3LXA3 575 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 FAM71AQ8IYT1 594 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 ASAP3Q8TDY4 903 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 GMCL1Q96IK5 515 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 AGAP3Q96P47 875 aa14.83□□□□□ -0.04
RTF1-201ENST00000389629 SRPK1Q96SB4 655 aaKnown RBP14.83□□□□□ -0.04
RTF1-201ENST00000389629 ROBO3Q96MS0 1386 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 PDGFRAP16234 1089 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 ADRA2BP18089 450 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 ELK3P41970 407 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 DCAF12L1Q5VU92 463 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 LLGL2Q6P1M3 1020 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 RFWD2Q8NHY2 731 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 FAM163AQ96GL9 167 aaPredicted RBP14.82□□□□□ -0.04
RTF1-201ENST00000389629 TAAR1Q96RJ0 339 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 SAE1Q9UBE0 346 aaPredicted RBP14.82□□□□□ -0.04
RTF1-201ENST00000389629 ATF5Q9Y2D1 282 aaPredicted RBP14.82□□□□□ -0.04
RTF1-201ENST00000389629 ATP9BO43861 1147 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 MUTP22033 750 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 BAATQ14032 418 aaPredicted RBP14.82□□□□□ -0.04
RTF1-201ENST00000389629 RFWD3Q6PCD5 774 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 C16orf89Q6UX73 402 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 ECSITQ9BQ95 431 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 JPH1Q9HDC5 661 aaPredicted RBP14.82□□□□□ -0.04
RTF1-201ENST00000389629 CHKBQ9Y259 395 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 IVNS1ABPQ9Y6Y0 642 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 POLRMTO00411 1230 aaKnown RBP14.82□□□□□ -0.04
RTF1-201ENST00000389629 GSC2O15499 205 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 TRABD2AQ86V40 505 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 IFNEQ86WN2 208 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 GALNT15Q8N3T1 639 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 USP13Q92995 863 aaPredicted RBP14.82□□□□□ -0.04
RTF1-201ENST00000389629 L3MBTL3Q96JM7 780 aaPredicted RBP14.82□□□□□ -0.04
RTF1-201ENST00000389629 CLPTM1LQ96KA5 538 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 FAM84AQ96KN4 292 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 MED10Q9BTT4 135 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 R3HDM2Q9Y2K5 976 aaKnown RBP14.82□□□□□ -0.04
RTF1-201ENST00000389629 APOL1O14791 398 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 PEX1O43933 1283 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 TBCCQ15814 346 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 FASTKD1Q53R41 847 aaKnown RBP14.82□□□□□ -0.04
RTF1-201ENST00000389629 ANO7Q6IWH7 933 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 ALYREFQ86V81 257 aaKnown RBP14.82□□□□□ -0.04
RTF1-201ENST00000389629 CPNE8Q86YQ8 564 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 TMC2Q8TDI7 906 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 WDR60Q8WVS4 1066 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 FAM210AQ96ND0 272 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 SPC25Q9HBM1 224 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 SHOC2Q9UQ13 582 aa14.82□□□□□ -0.04
RTF1-201ENST00000389629 RTN3O95197 1032 aaPredicted RBP14.81□□□□□ -0.04
RTF1-201ENST00000389629 ADRB2P07550 413 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 ZFXP17010 805 aaPredicted RBP14.81□□□□□ -0.04
RTF1-201ENST00000389629 PRKCEQ02156 737 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 SLC1A5Q15758 541 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 LPCAT2Q7L5N7 544 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 DDI1Q8WTU0 396 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 WDR18Q9BV38 432 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 ZNF229Q9UJW7 825 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 AKT3Q9Y243 479 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 ACTL7BQ9Y614 415 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 APBA3O96018 575 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 PYGLP06737 847 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 STRIP1Q5VSL9 837 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 DSTYKQ6XUX3 929 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 SLC26A11Q86WA9 606 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 DDHD1Q8NEL9 900 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 SH3TC2Q8TF17 1288 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 ADNPQ9H2P0 1102 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 PCDH9Q9HC56 1237 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 ANKEF1Q9NU02 776 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 STX18Q9P2W9 335 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms