RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 CCDC106Q9BWC9 280 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 ANO3Q9BYT9 981 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 NUF2Q9BZD4 464 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 PLK2Q9NYY3 685 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 STRIP2Q9ULQ0 834 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 USP17L15C9J2P7 530 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 USP17L13C9JLJ4 530 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 USP17L11C9JVI0 530 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 USP17L18D6R9N7 530 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 USP17L22D6RA61 530 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 USP17L17D6RBQ6 530 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 USP17L19D6RCP7 530 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 USP17L20D6RJB6 530 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 CLCN2P51788 898 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 USP17L24Q0WX57 530 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 HSF5Q4G112 596 aaPredicted RBP19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 FAM91A1Q658Y4 838 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 USP17L6PQ6QN14 398 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 ADGRD1Q6QNK2 874 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 APOPT1Q96IL0 206 aa19.8■□□□□ 0.76
SMARCD1-201ENST00000381513 IQANK1A0A1B0GTG1 560 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 DENND3A2RUS2 1198 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 CPOXP36551 454 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 BCAP31P51572 246 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 FMO1Q01740 532 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 SF3B3Q15393 1217 aaKnown RBP19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 ATG16L1Q676U5 607 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 MIER3Q7Z3K6 550 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 CHSY1Q86X52 802 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 CTAGE3PQ8IX95 158 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 RTKN2Q8IZC4 609 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 ZNF696Q9H7X3 374 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 RABGAP1Q9Y3P9 1069 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 FAAP100Q0VG06 881 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 OGFOD2Q6N063 350 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 ZCCHC23Q6ZST2 131 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 NUDCD3Q8IVD9 361 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 LRRC47Q8N1G4 583 aaKnown RBP19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 SCAIQ8N9R8 606 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 CROTQ9UKG9 612 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 CLUHO75153 1309 aa19.79■□□□□ 0.76
SMARCD1-201ENST00000381513 KIF13AQ9H1H9 1805 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 PFKPQ01813 784 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 FBXO36Q8NEA4 188 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 FAM84BQ96KN1 310 aaPredicted RBP19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 PSTPIP2Q9H939 334 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 K7EPI3 171 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 CDH3P22223 829 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 PHKA2P46019 1235 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 KPNA1P52294 538 aaPredicted RBP19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 TCEAL1Q15170 157 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 CLVS1Q8IUQ0 354 aaPredicted RBP19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 CEP95Q96GE4 821 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 C1orf21Q9H246 121 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 COPS7BQ9H9Q2 264 aaPredicted RBP19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 SSX2IPQ9Y2D8 614 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 CYB561D2O14569 222 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 CCNT2O60583 730 aaKnown RBP19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 SERPINA6P08185 405 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 CPA3P15088 417 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 ACADVLP49748 655 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 CDK9P50750 372 aaKnown RBP19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 RPL26P61254 145 aaKnown RBP19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 DMPKQ09013 629 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 MORF4L2Q15014 288 aa19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 OGFRL1Q5TC84 451 aaPredicted RBP19.78■□□□□ 0.76
SMARCD1-201ENST00000381513 USP54Q70EL1 1684 aa19.77■□□□□ 0.76
SMARCD1-201ENST00000381513 ZBTB11O95625 1053 aaPredicted RBP19.77■□□□□ 0.76
SMARCD1-201ENST00000381513 ALDH2P05091 517 aa19.77■□□□□ 0.76
SMARCD1-201ENST00000381513 KRT5P13647 590 aa19.77■□□□□ 0.76
SMARCD1-201ENST00000381513 NCF2P19878 526 aaPredicted RBP19.77■□□□□ 0.76
SMARCD1-201ENST00000381513 PPARGP37231 505 aaPredicted RBP19.77■□□□□ 0.76
SMARCD1-201ENST00000381513 C21orf59P57076 290 aa19.77■□□□□ 0.76
SMARCD1-201ENST00000381513 MRPS22P82650 360 aaKnown RBP19.77■□□□□ 0.76
SMARCD1-201ENST00000381513 TBCCQ15814 346 aa19.77■□□□□ 0.76
SMARCD1-201ENST00000381513 ZNF423Q2M1K9 1284 aa19.77■□□□□ 0.76
SMARCD1-201ENST00000381513 RSPH3Q86UC2 560 aa19.77■□□□□ 0.76
SMARCD1-201ENST00000381513 SENP7Q9BQF6 1050 aa19.77■□□□□ 0.76
SMARCD1-201ENST00000381513 AGPAT3Q9NRZ7 376 aa19.77■□□□□ 0.76
SMARCD1-201ENST00000381513 RAB26Q9ULW5 256 aa19.77■□□□□ 0.76
SMARCD1-201ENST00000381513 POLIQ9UNA4 740 aa19.77■□□□□ 0.76
SMARCD1-201ENST00000381513 ETV4P43268 484 aa19.77■□□□□ 0.75
SMARCD1-201ENST00000381513 BMT2Q1RMZ1 405 aa19.77■□□□□ 0.75
SMARCD1-201ENST00000381513 FAM178BQ8IXR5 827 aa19.77■□□□□ 0.75
SMARCD1-201ENST00000381513 AGAP3Q96P47 875 aa19.77■□□□□ 0.75
SMARCD1-201ENST00000381513 TMEM121Q9BTD3 319 aa19.77■□□□□ 0.75
SMARCD1-201ENST00000381513 FUCA1P04066 466 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 PSMC3P17980 439 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 RFX1P22670 979 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 ADSSP30520 456 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 DCAF6Q58WW2 860 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 PPP1R2P3Q6NXS1 205 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 BORAQ6PGQ7 559 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 NOCTQ9UK39 431 aaKnown RBP19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 ZNF804BA4D1E1 1349 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 COL1A1P02452 1464 aaPredicted RBP19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 TOM1L1O75674 476 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 CD48P09326 243 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 MSX2P35548 267 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms