RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 TMEM179Q6ZVK1 233 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 CAMK1DQ8IU85 385 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 LCORLQ8N3X6 602 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 WDR36Q8NI36 951 aaKnown RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 PPWD1Q96BP3 646 aaKnown RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 RDH12Q96NR8 316 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 ZSCAN32Q9NX65 697 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 SCN3BQ9NY72 215 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 CORO2BQ9UQ03 480 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 SALL1Q9NSC2 1324 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 A0A0G2JLW4 131 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 A6NJR5 290 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 HSPA4LO95757 839 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 TGM6O95932 706 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 CRKP46108 304 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 MSLNQ13421 630 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 SCYL2Q6P3W7 929 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 NPAP1Q9NZP6 1156 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 CHORDC1Q9UHD1 332 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 SUGT1Q9Y2Z0 365 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 PAPPAQ13219 1627 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 FAM95CA0A1B0GW59 222 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 DCDC2CA8MYV0 355 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 TRDMT1O14717 391 aaKnown RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 ZNF263O14978 683 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 SYNCRIPO60506 623 aaKnown RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 PGM3O95394 542 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 RPLP2P05387 115 aaKnown RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 CDH3P22223 829 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 BCAP31P51572 246 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 CDK16Q00536 496 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 EXOSC10Q01780 885 aaKnown RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 LPIN1Q14693 890 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 SAMD4BQ5PRF9 694 aaKnown RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 FAM91A1Q658Y4 838 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 GET4Q7L5D6 327 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 DYMQ7RTS9 669 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 C17orf53Q8N3J3 647 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 DNAJB8Q8NHS0 232 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 FAR1Q8WVX9 515 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 GNGT2O14610 69 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 TRIM66O15016 1216 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 SMNDC1O75940 238 aaKnown RBP eCLIP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 KLHL18O94889 574 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 NPR3P17342 541 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 C9orf131Q5VYM1 1079 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 DHDDSQ86SQ9 333 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 FAM172AQ8WUF8 416 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 ZBTB9Q96C00 473 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 TMCO6Q96DC7 493 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 AAASQ9NRG9 546 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 EURLQ9NYK6 297 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 NDUFB9Q9Y6M9 179 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 PRPF4O43172 522 aaKnown RBP eCLIP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 HSD17B3P37058 310 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 WASHC5Q12768 1159 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 IL18R1Q13478 541 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 E2F5Q15329 346 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 ADCK5Q3MIX3 580 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 STXBP5Q5T5C0 1151 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 NIPAL1Q6NVV3 410 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 ADSSL1Q8N142 457 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 APOL2Q9BQE5 337 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 BDH2Q9BUT1 245 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 MTMR12Q9C0I1 747 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 KRCC1Q9NPI7 259 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 CCDC59Q9P031 241 aaKnown RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 ZNF451Q9Y4E5 1061 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 CROCCQ5TZA2 2017 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 ZNF318Q5VUA4 2279 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 NMT2O60551 498 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 PDE8BO95263 885 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 GJB6O95452 261 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 ATP1A3P13637 1013 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 PTX3P26022 381 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 SOX5P35711 763 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 ZC3H12AQ5D1E8 599 aaKnown RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 TNFAIP8L3Q5GJ75 292 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 PDXDC2PQ6P474 469 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 TMC3Q7Z5M5 1100 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 RDM1Q8NG50 284 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 FAM20AQ96MK3 541 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 C1orf21Q9H246 121 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 SEC31BQ9NQW1 1179 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 QPCTLQ9NXS2 382 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 ANAPC2Q9UJX6 822 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 GTF3C4Q9UKN8 822 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 DTNAQ9Y4J8 743 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 A0A0D9SFI3 127 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 AXIN1O15169 862 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 GPC4O75487 556 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 EIF2AK2P19525 551 aaKnown RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 ADCY1Q08828 1119 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 STXBP2Q15833 593 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 NAIF1Q69YI7 327 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 LINC00523Q86TU6 105 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 ARL10Q8N8L6 244 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 TOR1AIP2Q8NFQ8 470 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 POMGNT1Q8WZA1 660 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 FAM84AQ96KN4 292 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms