RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 MMRN1Q13201 1228 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 SV2CQ496J9 727 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 IQSEC1Q6DN90 963 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 CCDC62Q6P9F0 684 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 RAPH1Q70E73 1250 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDX2-201ENST00000381020 ZC3H7BQ9UGR2 993 aaKnown RBP13.07□□□□□ -0.32
CDX2-201ENST00000381020 CCDC195A0A1B0GUA6 201 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 FSCN2O14926 492 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 ATP9BO43861 1147 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 SSTR1P30872 391 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 MAGEA9P43362 315 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 RCN2Q14257 317 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 C6orf163Q5TEZ5 329 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 ADGRF2Q8IZF7 708 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 NETO2Q8NC67 525 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 PIH1D1Q9NWS0 290 aaKnown RBP13.07□□□□□ -0.32
CDX2-201ENST00000381020 LRFN2Q9ULH4 789 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 STXBP5LQ9Y2K9 1186 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 KIAA1551Q9HCM1 1747 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 DCDC2CA8MYV0 355 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 POMCP01189 267 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 SMIM10L2AP0DMW4 78 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 SMIM10L2BP0DMW5 78 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 SLC12A2P55011 1212 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 GEN1Q17RS7 908 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 KLHL38Q2WGJ6 581 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 BZW1Q7L1Q6 419 aaKnown RBP13.07□□□□□ -0.32
CDX2-201ENST00000381020 KATNAL2Q8IYT4 538 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 USP33Q8TEY7 942 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 GAD1Q99259 594 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 B3GNT5Q9BYG0 378 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 TJP2Q9UDY2 1190 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 PPME1Q9Y570 386 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 E2F8A0AVK6 867 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 TNFRSF8P28908 595 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 PSEN2P49810 448 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 MAP3K7CLP57077 242 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 TSPY1Q01534 308 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 SEPT6Q14141 434 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 NPNTQ6UXI9 565 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 MON1BQ7L1V2 547 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 PGBD4Q96DM1 585 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 SCYL1Q96KG9 808 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 CYTH2Q99418 400 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.06□□□□□ -0.32
CDX2-201ENST00000381020 TMEM191CA6NGB0 347 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 AP1G2O75843 785 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 KITP10721 976 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 GHRP10912 638 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 DNAJC3Q13217 504 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 ZNF268Q14587 947 aaPredicted RBP13.06□□□□□ -0.32
CDX2-201ENST00000381020 FBXW10Q5XX13 1052 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 CRELD2Q6UXH1 353 aaPredicted RBP13.06□□□□□ -0.32
CDX2-201ENST00000381020 TSHZ1Q6ZSZ6 1077 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 CDKL3Q8IVW4 592 aaPredicted RBP13.06□□□□□ -0.32
CDX2-201ENST00000381020 PPIL6Q8IXY8 311 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 FBXO36Q8NEA4 188 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 MAML1Q92585 1016 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 SLITRK1Q96PX8 696 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 NCAPGQ9BPX3 1015 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 ROPN1BQ9BZX4 212 aaPredicted RBP13.06□□□□□ -0.32
CDX2-201ENST00000381020 ROPN1Q9HAT0 212 aaPredicted RBP13.06□□□□□ -0.32
CDX2-201ENST00000381020 NAALADL1Q9UQQ1 740 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 KPNA7A9QM74 516 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 BANF1O75531 89 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 PAEPP09466 180 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 FAM200BP0CF97 657 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 UNGP13051 313 aaPredicted RBP13.06□□□□□ -0.32
CDX2-201ENST00000381020 TMPRSS15P98073 1019 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 ZNF200P98182 395 aaPredicted RBP13.06□□□□□ -0.32
CDX2-201ENST00000381020 DUSP28Q4G0W2 176 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 THEM5Q8N1Q8 247 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 TMEM130Q8N3G9 435 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 LRRC19Q9H756 370 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 KIAA1257Q9ULG3 409 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 LAMB2P55268 1798 aa13.06□□□□□ -0.32
CDX2-201ENST00000381020 FOXO6A8MYZ6 492 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 H3BRJ5 948 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 LPXNO60711 386 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 SMPD1P17405 629 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 TPI1P60174 286 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 MBTD1Q05BQ5 628 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 FSCN1Q16658 493 aaKnown RBP13.05□□□□□ -0.32
CDX2-201ENST00000381020 KIAA1841Q6NSI8 718 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 CD302Q8IX05 232 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 BRI3BPQ8WY22 251 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 DDIT4Q9NX09 232 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDX2-201ENST00000381020 NINJ2Q9NZG7 142 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 MAST2Q6P0Q8 1798 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 SCN9AQ15858 1988 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 FAM47DPA6NHR8 397 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 SIGLEC16A6NMB1 481 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 B4GALT4O60513 344 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 TCF4P15884 667 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 GRIK1P39086 918 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 PEX5P50542 639 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 CNGA2Q16280 664 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 MDH1BQ5I0G3 518 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms