RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 APOL5Q9BWW9 433 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 IL1RL2Q9HB29 575 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 DMGDHQ9UI17 866 aaKnown RBP16.64■□□□□ 0.25
COL2A1-202ENST00000380518 HEATR9A2RTY3 570 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 ACADSP16219 412 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 TARSP26639 723 aaKnown RBP16.64■□□□□ 0.25
COL2A1-202ENST00000380518 PPP3CCP48454 512 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 NTRK3Q16288 839 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 CCDC126Q96EE4 140 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 SELENONQ9NZV5 590 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 NUDT2P50583 147 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 TTLL9Q3SXZ7 439 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 SAMD7Q7Z3H4 446 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 ZNF571Q7Z3V5 609 aaPredicted RBP16.64■□□□□ 0.25
COL2A1-202ENST00000380518 DTNBP1Q96EV8 351 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 OLFML3Q9NRN5 406 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 AAR2Q9Y312 384 aaKnown RBP16.64■□□□□ 0.25
COL2A1-202ENST00000380518 AP1G2O75843 785 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 LSM8O95777 96 aaKnown RBP16.63■□□□□ 0.25
COL2A1-202ENST00000380518 IRF1P10914 325 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 HSPA13P48723 471 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 NFIAQ12857 509 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 KCNT1Q5JUK3 1230 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 PLEKHA8Q96JA3 519 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 NUDT12Q9BQG2 462 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 BRD8Q9H0E9 1235 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 EHD4Q9H223 541 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 TBC1D23Q9NUY8 699 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 SCN3BQ9NY72 215 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 CRLS1Q9UJA2 301 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 SOX11P35716 441 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 ZNF157P51786 506 aaPredicted RBP16.63■□□□□ 0.25
COL2A1-202ENST00000380518 C2CD6Q53TS8 623 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 UGT3A1Q6NUS8 523 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 TAS1R2Q8TE23 839 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 CNPY3Q9BT09 278 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 CDC42EP4Q9H3Q1 356 aaKnown RBP16.63■□□□□ 0.25
COL2A1-202ENST00000380518 H2AFYO75367 372 aaKnown RBP16.63■□□□□ 0.25
COL2A1-202ENST00000380518 UPP2O95045 317 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 FGFR2P21802 821 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 CCNG2Q16589 344 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 SGO1Q5FBB7 561 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 CYB5D1Q6P9G0 228 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 DENND5BQ6ZUT9 1274 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 ACOT1Q86TX2 421 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 P3H2Q8IVL5 708 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 B4GALNT2Q8NHY0 566 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 LRRC40Q9H9A6 602 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 SCAF8Q9UPN6 1271 aaKnown RBP16.63■□□□□ 0.25
COL2A1-202ENST00000380518 SPATA31A6Q5VVP1 1343 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 KDM1AO60341 852 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 SUPT7LO94864 414 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 WDR47O94967 919 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 ARIH2O95376 493 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 RAP1GDS1P52306 607 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 RUNX1T1Q06455 604 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 ACBD5Q5T8D3 534 aaPredicted RBP16.63■□□□□ 0.25
COL2A1-202ENST00000380518 CINPQ9BW66 212 aaPredicted RBP16.63■□□□□ 0.25
COL2A1-202ENST00000380518 RIOX1Q9H6W3 641 aa16.63■□□□□ 0.25
COL2A1-202ENST00000380518 TRMT6Q9UJA5 497 aaKnown RBP16.63■□□□□ 0.25
COL2A1-202ENST00000380518 PRG3Q9Y2Y8 225 aaPredicted RBP16.63■□□□□ 0.25
COL2A1-202ENST00000380518 THRAP10827 490 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 ALDH1A3P47895 512 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 SERPINB8P50452 374 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 GLRA4Q5JXX5 417 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 TDRD10Q5VZ19 366 aaKnown RBP16.62■□□□□ 0.25
COL2A1-202ENST00000380518 BBS7Q8IWZ6 715 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 USP13Q92995 863 aaPredicted RBP16.62■□□□□ 0.25
COL2A1-202ENST00000380518 AGXT2Q9BYV1 514 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 ABI2Q9NYB9 513 aaPredicted RBP16.62■□□□□ 0.25
COL2A1-202ENST00000380518 CLCA2Q9UQC9 943 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 KRT8P05787 483 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 HNRNPH1P31943 449 aaKnown RBP16.62■□□□□ 0.25
COL2A1-202ENST00000380518 HORMAD1Q86X24 394 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 UNC45BQ8IWX7 931 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 C4orf19Q8IY42 314 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 RPRD1AQ96P16 312 aaPredicted RBP16.62■□□□□ 0.25
COL2A1-202ENST00000380518 ECSITQ9BQ95 431 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 KCTD10Q9H3F6 313 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 OSGEPQ9NPF4 335 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 M0R3G1 203 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 GMCL1P1Q8NEA9 526 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 FAM172AQ8WUF8 416 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 PRMT6Q96LA8 375 aaPredicted RBP16.62■□□□□ 0.25
COL2A1-202ENST00000380518 TMX2Q9Y320 296 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 PGK2P07205 417 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 SLC11A2P49281 568 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 CLCN3P51790 818 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 MRPS15P82914 257 aaKnown RBP16.62■□□□□ 0.25
COL2A1-202ENST00000380518 CLEC16AQ2KHT3 1053 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 SPOCD1Q6ZMY3 1216 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 ABHD8Q96I13 439 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 KLK14Q9P0G3 267 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 DLGAP2Q9P1A6 1054 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 SLC24A2Q9UI40 661 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 FAM205AQ6ZU69 1335 aa16.62■□□□□ 0.25
COL2A1-202ENST00000380518 GOLGA8TH3BQL2 631 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 B3GAT3O94766 335 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 ALBP02768 609 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 BCAT1P54687 386 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms