RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 CATSPERBQ9H7T0 1116 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 USP21Q9UK80 565 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 HECW2Q9P2P5 1572 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 STX7O15400 261 aaKnown RBP17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 MPOP05164 745 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 YY1P25490 414 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 CHN2P52757 468 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 GRB10Q13322 594 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 MAPRE1Q15691 268 aaKnown RBP17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 ZC2HC1CQ53FD0 456 aaPredicted RBP17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 CACHD1Q5VU97 1274 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 RAB42Q8N4Z0 105 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 VPS33AQ96AX1 596 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 ARAP3Q8WWN8 1544 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 RGS5O15539 181 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 ANXA9O76027 345 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 BLVRAP53004 296 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 OTULINQ96BN8 352 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 DMAP1Q9NPF5 467 aaPredicted RBP17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 AGPAT3Q9NRZ7 376 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 MKRN4PQ13434 485 aaPredicted RBP17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 CCDC153Q494R4 210 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 RSBN1Q5VWQ0 802 aaPredicted RBP17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 NDEL1Q9GZM8 345 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 SEMA4AQ9H3S1 761 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 FANCEQ9HB96 536 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 IGSF9BQ9UPX0 1349 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 PHGDHO43175 533 aaKnown RBP17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 RAD23AP54725 363 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 FAM84BQ96KN1 310 aaPredicted RBP17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 DDX18Q9NVP1 670 aaKnown RBP17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 AP1G2O75843 785 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 TTLL4Q14679 1199 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 DIS3LQ8TF46 1054 aaKnown RBP17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 ATG4AQ8WYN0 398 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 OMA1Q96E52 524 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 RIT2Q99578 217 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 ZNF518BQ9C0D4 1074 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 EPB41L4AQ9HCS5 686 aaPredicted RBP17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 THAP1Q9NVV9 213 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 CDC42BPAQ5VT25 1732 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 SMIM31A0A1B0GVY4 71 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 MED26O95402 600 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 MOCS2O96007 188 aaPredicted RBP17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 CYP2C8P10632 490 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 IMPDH2P12268 514 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 ST13P50502 369 aaKnown RBP17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 ILF2Q12905 390 aaKnown RBP17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 ITGB3BPQ13352 177 aaPredicted RBP17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 DENND1BQ6P3S1 775 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 APPL2Q8NEU8 664 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 OR6Y1Q8NGX8 325 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 FAM81AQ8TBF8 368 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 ZNF333Q96JL9 665 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 PCDH9Q9HC56 1237 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 V9GYQ6 96 aa17.69■□□□□ 0.42
COL4A3BP-203ENST00000380494 PNMA8CA0A1B0GUJ8 204 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 BNIP3LO60238 219 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 ERVK-9P63128 1117 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 CDC42EP1Q00587 391 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 SLC45A4Q5BKX6 768 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 TBCELQ5QJ74 424 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 FLCNQ8NFG4 579 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 AGAP11Q8TF27 550 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 AFG1LQ8WV93 481 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 DCUN1D1Q96GG9 259 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 ABHD8Q96I13 439 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 SEMA6BQ9H3T3 888 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 ACAD9Q9H845 621 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 HMG20AQ9NP66 347 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 SORCS3Q9UPU3 1222 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 ADGRA2Q96PE1 1338 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 E2F8A0AVK6 867 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 TPST1O60507 370 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 CUL2Q13617 745 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 UGT3A1Q6NUS8 523 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 ZNF571Q7Z3V5 609 aaPredicted RBP17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 CLVS1Q8IUQ0 354 aaPredicted RBP17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 TMEM237Q96Q45 408 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 WDR70Q9NW82 654 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 USE1Q9NZ43 259 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 PKP3Q9Y446 797 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 SERPINE1P05121 402 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 FAM153BP0C7A2 387 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 CPA3P15088 417 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 ACOT2P49753 483 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 NFYCQ13952 458 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 TMEM132DQ14C87 1099 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 SMTNL2Q2TAL5 461 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 FAM153CQ494X1 144 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 C19orf18Q8NEA5 215 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 C17orf75Q9HAS0 396 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 SELENONQ9NZV5 590 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 AGAP1Q9UPQ3 857 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 RUVBL2Q9Y230 463 aaKnown RBP17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 CAMSAP1Q5T5Y3 1602 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 C1orf232A0A0U1RR37 186 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 CNOT3O75175 753 aaKnown RBP17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 SGPL1O95470 568 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 TGM2P21980 687 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms