RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 MYL6P60660 151 aa20.17■□□□□ 0.82
TMEM88B-201ENST00000378821 NOP14P78316 857 aaKnown RBP20.17■□□□□ 0.82
TMEM88B-201ENST00000378821 RUNX3Q13761 415 aa20.17■□□□□ 0.82
TMEM88B-201ENST00000378821 NFIL3Q16649 462 aa20.17■□□□□ 0.82
TMEM88B-201ENST00000378821 COBLL1Q53SF7 1204 aa20.17■□□□□ 0.82
TMEM88B-201ENST00000378821 SYAP1Q96A49 352 aaPredicted RBP20.17■□□□□ 0.82
TMEM88B-201ENST00000378821 C8orf48Q96LL4 319 aa20.17■□□□□ 0.82
TMEM88B-201ENST00000378821 SLC22A12Q96S37 553 aa20.17■□□□□ 0.82
TMEM88B-201ENST00000378821 HELZP42694 1942 aaKnown RBP20.17■□□□□ 0.82
TMEM88B-201ENST00000378821 TRDMT1O14717 391 aaKnown RBP20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 USP17L7P0C7H9 530 aa20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 PTPN1P18031 435 aaKnown RBP20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 NR2F2P24468 414 aa20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 HOXA6P31267 233 aa20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 TNNC1P63316 161 aa20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 PON2Q15165 354 aa20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 PDGFRLQ15198 375 aa20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 ZNF77Q15935 545 aa20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 TDRD10Q5VZ19 366 aaKnown RBP20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 CEP135Q66GS9 1140 aa20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 ISM2Q6H9L7 571 aa20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 SCN4BQ8IWT1 228 aa20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 TTC8Q8TAM2 541 aa20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 CYP2S1Q96SQ9 504 aa20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 SNX25Q9H3E2 840 aa20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 RBM12Q9NTZ6 932 aaKnown RBP20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 LMBRD1Q9NUN5 540 aa20.16■□□□□ 0.82
TMEM88B-201ENST00000378821 TRAV19A0A0A6YYK7 116 aa20.15■□□□□ 0.82
TMEM88B-201ENST00000378821 LRRIQ3A6PVS8 624 aaPredicted RBP20.15■□□□□ 0.82
TMEM88B-201ENST00000378821 K7ESF4 209 aa20.15■□□□□ 0.82
TMEM88B-201ENST00000378821 TRIM66O15016 1216 aa20.15■□□□□ 0.82
TMEM88B-201ENST00000378821 SATB1Q01826 763 aa20.15■□□□□ 0.82
TMEM88B-201ENST00000378821 USP4Q13107 963 aa20.15■□□□□ 0.82
TMEM88B-201ENST00000378821 TRPC3Q13507 836 aa20.15■□□□□ 0.82
TMEM88B-201ENST00000378821 TMEM196Q5HYL7 178 aa20.15■□□□□ 0.82
TMEM88B-201ENST00000378821 DENND5BQ6ZUT9 1274 aa20.15■□□□□ 0.82
TMEM88B-201ENST00000378821 KIAA1958Q8N8K9 716 aa20.15■□□□□ 0.82
TMEM88B-201ENST00000378821 OR6B3Q8NGW1 331 aa20.15■□□□□ 0.82
TMEM88B-201ENST00000378821 TMC2Q8TDI7 906 aa20.15■□□□□ 0.82
TMEM88B-201ENST00000378821 GBP4Q96PP9 640 aa20.15■□□□□ 0.82
TMEM88B-201ENST00000378821 EBF3Q9H4W6 596 aa20.15■□□□□ 0.82
TMEM88B-201ENST00000378821 EHD2Q9NZN4 543 aa20.15■□□□□ 0.82
TMEM88B-201ENST00000378821 BIN1O00499 593 aa20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 IKBKBO14920 756 aa20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 MAPK13O15264 365 aa20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 VNN1O95497 513 aa20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 BMP6P22004 513 aa20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 GRIK1P39086 918 aa20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 PPP3CCP48454 512 aa20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 MCCD1P59942 119 aaPredicted RBP20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 USP46P62068 366 aa20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 CYP27A1Q02318 531 aa20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 CAMK4Q16566 473 aa20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 MDH1BQ5I0G3 518 aa20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 Q6ZS52 159 aa20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 B3GALNT2Q8NCR0 500 aa20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 DPEP3Q9H4B8 488 aa20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 TMEM30AQ9NV96 361 aa20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 ARHGAP26Q9UNA1 814 aa20.14■□□□□ 0.81
TMEM88B-201ENST00000378821 GPR179Q6PRD1 2367 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 C2orf78A6NCI8 922 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 AKAP3O75969 853 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 OLFM2O95897 454 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 ARSAP15289 507 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 CD44P16070 742 aaKnown RBP20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 PDE6CP51160 858 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 NCOA4Q13772 614 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 MORC3Q14149 939 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 MTF1Q14872 753 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 EDRF1Q3B7T1 1238 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 ZACNQ401N2 412 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 TRIM68Q6AZZ1 485 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 CC2D1AQ6P1N0 951 aaPredicted RBP20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 DCLK2Q8N568 766 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 ARL14EPQ8N8R7 260 aaPredicted RBP20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 OSCP1Q8WVF1 389 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 B3GNT5Q9BYG0 378 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 GTPBP4Q9BZE4 634 aaKnown RBP20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 ELOVL4Q9GZR5 314 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 NXF1Q9UBU9 619 aaKnown RBP20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 FRMD4BQ9Y2L6 1034 aa20.13■□□□□ 0.81
TMEM88B-201ENST00000378821 TRIM49BA6NDI0 452 aa20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 ZNF840PA6NDX5 716 aa20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 F8VP50 259 aa20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 PHACTR2O75167 634 aa20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 HDCP19113 662 aa20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 RPL13P26373 211 aaKnown RBP20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 ANXA13P27216 316 aa20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 PMS1P54277 932 aaKnown RBP20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 CACNA2D1P54289 1103 aa20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 DLG4P78352 724 aa20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 ZXDBP98169 803 aa20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 AMPD2Q01433 879 aa20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 ENPEPQ07075 957 aa20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 C1orf220Q5T0J3 134 aa20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 FSTL4Q6MZW2 842 aa20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 CLSTN2Q9H4D0 955 aa20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 TRPC7Q9HCX4 862 aa20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 C2orf42Q9NWW7 574 aa20.12■□□□□ 0.81
TMEM88B-201ENST00000378821 SMG5Q9UPR3 1016 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms