RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 DMTF1Q9Y222 760 aa8.57□□□□□ -1.04
PTPRR-203ENST00000378778 PLLPQ9Y342 182 aa8.57□□□□□ -1.04
PTPRR-203ENST00000378778 NUMBLQ9Y6R0 609 aa8.57□□□□□ -1.04
PTPRR-203ENST00000378778 H0YJX3 145 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 H3BRJ5 948 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 SGK1O00141 431 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 CHADO15335 359 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 OPHN1O60890 802 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 NDUFB10O96000 172 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 FAM200BP0CF97 657 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 PYGBP11216 843 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 CCDC130P13994 396 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 VCLP18206 1134 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 CDKN2BP42772 138 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 FASTKD3Q14CZ7 662 aaKnown RBP8.56□□□□□ -1.04
PTPRR-203ENST00000378778 ACAP1Q15027 740 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 BRDTQ58F21 947 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-203ENST00000378778 ZFP1Q6P2D0 407 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 TIFABQ6ZNK6 161 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 RTKN2Q8IZC4 609 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 FBXO36Q8NEA4 188 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 ACTRT2Q8TDY3 377 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 TAS1R2Q8TE23 839 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 FNIP1Q8TF40 1166 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 CHURC1Q8WUH1 139 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 CPT1BQ92523 772 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 PLEKHG4BQ96PX9 1271 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 ZNF696Q9H7X3 374 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 NRDE2Q9H7Z3 1164 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 FBXO6Q9NRD1 293 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-203ENST00000378778 METTL5Q9NRN9 209 aaKnown RBP8.56□□□□□ -1.04
PTPRR-203ENST00000378778 THAP1Q9NVV9 213 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 SLC17A7Q9P2U7 560 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 PPARGC1AQ9UBK2 798 aaKnown RBP8.56□□□□□ -1.04
PTPRR-203ENST00000378778 CHORDC1Q9UHD1 332 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-203ENST00000378778 NR2E3Q9Y5X4 410 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 ZSCAN9O15535 394 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-203ENST00000378778 RNASEH1O60930 286 aaKnown RBP8.56□□□□□ -1.04
PTPRR-203ENST00000378778 KRT38O76015 456 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 CD58P19256 250 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 BGNP21810 368 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 MMP8P22894 467 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 SFNP31947 248 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 JAK3P52333 1124 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 AP3M2P53677 418 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 NOP14P78316 857 aaKnown RBP8.56□□□□□ -1.04
PTPRR-203ENST00000378778 CNTN2Q02246 1040 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 OVGP1Q12889 678 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 PSMD6Q15008 389 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 CFAP157Q5JU67 520 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 ACBD5Q5T8D3 534 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-203ENST00000378778 CDC42EP5Q6NZY7 148 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 MFSD7Q6UXD7 560 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 CYS1Q717R9 158 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 TRIM74Q86UV6 250 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 TRIM73Q86UV7 250 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 FAM160B2Q86V87 743 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 CLEC10AQ8IUN9 316 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 WDR75Q8IWA0 830 aaKnown RBP8.56□□□□□ -1.04
PTPRR-203ENST00000378778 ICA1LQ8NDH6 482 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 CYP2W1Q8TAV3 490 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 ACMSDQ8TDX5 336 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 CMTM5Q96DZ9 223 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 PRICKLE1Q96MT3 831 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-203ENST00000378778 KCNK16Q96T55 309 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 DNAAF2Q9NVR5 837 aaKnown RBP8.56□□□□□ -1.04
PTPRR-203ENST00000378778 GALNT8Q9NY28 637 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 HACD3Q9P035 362 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 MAD1L1Q9Y6D9 718 aa8.56□□□□□ -1.04
PTPRR-203ENST00000378778 A0A088AWK7 358 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 SDR42E2A6NKP2 422 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 CHMP2AO43633 222 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 UPP2O95045 317 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 TNFAIP8O95379 198 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 ENO1P06733 434 aaKnown RBP8.55□□□□□ -1.04
PTPRR-203ENST00000378778 ZCCHC18P0CG32 403 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 CRHR1P34998 444 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 CPOXP36551 454 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 ACADVLP49748 655 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 DMP1Q13316 513 aaPredicted RBP8.55□□□□□ -1.04
PTPRR-203ENST00000378778 PDK3Q15120 406 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 HADHQ16836 314 aaKnown RBP8.55□□□□□ -1.04
PTPRR-203ENST00000378778 ZACNQ401N2 412 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 USH1GQ495M9 461 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 TEX44Q53QW1 395 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 OGFRL1Q5TC84 451 aaPredicted RBP8.55□□□□□ -1.04
PTPRR-203ENST00000378778 UGT2A3Q6UWM9 527 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 PRPF39Q86UA1 669 aaKnown RBP8.55□□□□□ -1.04
PTPRR-203ENST00000378778 RHPN2Q8IUC4 686 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 CBWD2Q8IUF1 395 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 TMEM161BQ8NDZ6 487 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 DIS3LQ8TF46 1054 aaKnown RBP8.55□□□□□ -1.04
PTPRR-203ENST00000378778 RSAD2Q8WXG1 361 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 CPA5Q8WXQ8 436 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 HAUS1Q96CS2 278 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 ZDHHC15Q96MV8 337 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 FAM111AQ96PZ2 611 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 SRPK1Q96SB4 655 aaKnown RBP8.55□□□□□ -1.04
PTPRR-203ENST00000378778 THTPAQ9BU02 230 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 DNAJC28Q9NX36 388 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms