RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 STIP1P31948 543 aaKnown RBP14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 ERFP50548 548 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 PDK1Q15118 436 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 DENND1BQ6P3S1 775 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 ARHGAP24Q8N264 748 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 OR6P1Q8NGX9 317 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 PABPC5Q96DU9 382 aaKnown RBP14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 DDX27Q96GQ7 796 aaKnown RBP14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 TMEM121Q9BTD3 319 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 COLEC11Q9BWP8 271 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 SLC13A1Q9BZW2 595 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 ZC3H7BQ9UGR2 993 aaKnown RBP14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 GOLGA8RI6L899 631 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 PRRG1O14668 218 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 HMGCRP04035 888 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 SETSIPP0DME0 302 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 PRKAR2AP13861 404 aaKnown RBP14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 OVOS1Q6IE37 1185 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 TMEM169Q96HH4 297 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 SLITRK1Q96PX8 696 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 WDCPQ9H6R7 721 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 RPTORQ8N122 1335 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 CCDC78A2IDD5 438 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 GMNCA6NCL1 334 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 H0Y3Z8 333 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 CLGNO14967 610 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 PQBP1O60828 265 aaKnown RBP14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 MMP3P08254 477 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 RARAP10276 462 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 TKTL1P51854 596 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 MFSD7Q6UXD7 560 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 C3orf62Q6ZUJ4 267 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 SH3TC2Q8TF17 1288 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 ARL8AQ96BM9 186 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 PCDHA2Q9Y5H9 948 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 BTAF1O14981 1849 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 E5RJQ4 531 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 CST3P01034 146 aaPredicted RBP14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 TMPRSS15P98073 1019 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 SEPT8Q92599 483 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 LENG1Q96BZ8 264 aaPredicted RBP14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 IFT43Q96FT9 208 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 FOXP3Q9BZS1 431 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 SCNN1GP51170 649 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 MIB1Q86YT6 1006 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 C3orf20Q8ND61 904 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 KLHL29Q96CT2 875 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 SENP8Q96LD8 212 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 YIPF3Q9GZM5 350 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 TSPYL2Q9H2G4 693 aaPredicted RBP14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 PABPC3Q9H361 631 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 ZFATQ9P243 1243 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 GPC4O75487 556 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 ADSSP30520 456 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 CCNG2Q16589 344 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 AADACL2Q6P093 401 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 ZNF662Q6ZS27 426 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 DEFB128Q7Z7B8 93 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 SUFUQ9UMX1 484 aa14.79□□□□□ -0.04
SHROOM1-203ENST00000378679 PPP1R37O75864 691 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 ARIH2O95376 493 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 HOXC6P09630 235 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 PAMP19021 973 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 MLH1P40692 756 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 CTCFP49711 727 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 ZNF235Q14590 738 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 C10orf120Q5SQS8 335 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 LRIG3Q6UXM1 1119 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 ELMOD1Q8N336 334 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 C2CD2Q9Y426 696 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 UBR2Q8IWV8 1755 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 C3orf70A6NLC5 250 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 SMPD1P17405 629 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 RFC1P35251 1148 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 ADIGQ0VDE8 80 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 CNGA2Q16280 664 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 CTXN3Q4LDR2 81 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 ATXN7L3BQ96GX2 97 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 RAB21Q9UL25 225 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 AP4E1Q9UPM8 1137 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 AGTP01019 485 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 ELNP15502 786 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 RAB27AP51159 221 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 YWHAHQ04917 246 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 ASPHQ12797 758 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 RCN2Q14257 317 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 NBPF20Q3BBV1 942 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 TAF1BQ53T94 588 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 ATPAF2Q8N5M1 289 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 RAPGEF5Q92565 580 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 RNF208Q9H0X6 261 aa14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 NXF3Q9H4D5 531 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-203ENST00000378679 GPR25O00155 361 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 TREHO43280 583 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 TYK2P29597 1187 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 MARCKSL1P49006 195 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 FSTL1Q12841 308 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 SLFN11Q7Z7L1 901 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 NLRP14Q86W24 1093 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms