RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 RAD54BQ9Y620 910 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 KIF24Q5T7B8 1368 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 IFNGR2P38484 337 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 PSMC5P62195 406 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 ITGADQ13349 1161 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 AGAP9Q5VTM2 703 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 SWSAP1Q6NVH7 229 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 UTP15Q8TED0 518 aaKnown RBP11.01□□□□□ -0.65
RTN3-206ENST00000377819 SEPT1Q8WYJ6 367 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 CCDC126Q96EE4 140 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 WRNIP1Q96S55 665 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 NFKBIZQ9BYH8 718 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 ZSWIM6Q9HCJ5 1215 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 GABBR1Q9UBS5 961 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 MAN1B1Q9UKM7 699 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 AGAP1Q9UPQ3 857 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 ERBB4Q15303 1308 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 NEURL1BA8MQ27 555 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 AP3D1O14617 1153 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 ANXA9O76027 345 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 OR6B1O95007 311 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 GRK4P32298 578 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 PTGER2P43116 358 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 DRAP1Q14919 205 aaPredicted RBP11.01□□□□□ -0.65
RTN3-206ENST00000377819 SFR1Q86XK3 245 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 PROSER1Q86XN7 944 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 VSTM4Q8IW00 320 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 SLC25A41Q8N5S1 370 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 ATP6V1G3Q96LB4 118 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 RSPH9Q9H1X1 276 aaPredicted RBP11.01□□□□□ -0.65
RTN3-206ENST00000377819 KLC4Q9NSK0 619 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 PAK5Q9P286 719 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 NAGPAQ9UK23 515 aa11.01□□□□□ -0.65
RTN3-206ENST00000377819 ENO4A6NNW6 628 aa11□□□□□ -0.65
RTN3-206ENST00000377819 USP17L10C9JJH3 530 aa11□□□□□ -0.65
RTN3-206ENST00000377819 EEF2KO00418 725 aaKnown RBP11□□□□□ -0.65
RTN3-206ENST00000377819 ADGRB1O14514 1584 aa11□□□□□ -0.65
RTN3-206ENST00000377819 GH2P01242 217 aa11□□□□□ -0.65
RTN3-206ENST00000377819 CD4P01730 458 aa11□□□□□ -0.65
RTN3-206ENST00000377819 ITGALP20701 1170 aa11□□□□□ -0.65
RTN3-206ENST00000377819 SCP2P22307 547 aa11□□□□□ -0.65
RTN3-206ENST00000377819 AKR1D1P51857 326 aa11□□□□□ -0.65
RTN3-206ENST00000377819 TMEM132DQ14C87 1099 aa11□□□□□ -0.65
RTN3-206ENST00000377819 DGKDQ16760 1214 aa11□□□□□ -0.65
RTN3-206ENST00000377819 NOL9Q5SY16 702 aaKnown RBP11□□□□□ -0.65
RTN3-206ENST00000377819 PYHIN1Q6K0P9 492 aa11□□□□□ -0.65
RTN3-206ENST00000377819 ABRAXAS1Q6UWZ7 409 aa11□□□□□ -0.65
RTN3-206ENST00000377819 C4orf22Q6V702 233 aa11□□□□□ -0.65
RTN3-206ENST00000377819 CCDC54Q8NEL0 328 aa11□□□□□ -0.65
RTN3-206ENST00000377819 FRMD8Q9BZ67 464 aaPredicted RBP11□□□□□ -0.65
RTN3-206ENST00000377819 NRDE2Q9H7Z3 1164 aa11□□□□□ -0.65
RTN3-206ENST00000377819 PVALEFA0A1B0GWK0 134 aa11□□□□□ -0.65
RTN3-206ENST00000377819 STX16-NPEPL1H3BU86 382 aa11□□□□□ -0.65
RTN3-206ENST00000377819 STX16O14662 325 aa11□□□□□ -0.65
RTN3-206ENST00000377819 IDH3BO43837 385 aa11□□□□□ -0.65
RTN3-206ENST00000377819 C6orf222P0C671 652 aaPredicted RBP11□□□□□ -0.65
RTN3-206ENST00000377819 IRF1P10914 325 aa11□□□□□ -0.65
RTN3-206ENST00000377819 ACADSBP45954 432 aa11□□□□□ -0.65
RTN3-206ENST00000377819 CCR4P51679 360 aa11□□□□□ -0.65
RTN3-206ENST00000377819 RGS1Q08116 209 aa11□□□□□ -0.65
RTN3-206ENST00000377819 ALG11Q2TAA5 492 aa11□□□□□ -0.65
RTN3-206ENST00000377819 DDI2Q5TDH0 399 aa11□□□□□ -0.65
RTN3-206ENST00000377819 FAM196AQ6ZSG2 479 aa11□□□□□ -0.65
RTN3-206ENST00000377819 LINC00523Q86TU6 105 aa11□□□□□ -0.65
RTN3-206ENST00000377819 CENPLQ8N0S6 344 aaPredicted RBP11□□□□□ -0.65
RTN3-206ENST00000377819 GAL3ST3Q96A11 431 aa11□□□□□ -0.65
RTN3-206ENST00000377819 ARHGEF26Q96DR7 871 aa11□□□□□ -0.65
RTN3-206ENST00000377819 SAE1Q9UBE0 346 aaPredicted RBP11□□□□□ -0.65
RTN3-206ENST00000377819 RAB23Q9ULC3 237 aa11□□□□□ -0.65
RTN3-206ENST00000377819 MAFFQ9ULX9 164 aa11□□□□□ -0.65
RTN3-206ENST00000377819 ARIH1Q9Y4X5 557 aaPredicted RBP11□□□□□ -0.65
RTN3-206ENST00000377819 SPATA31D1Q6ZQQ2 1576 aa11□□□□□ -0.65
RTN3-206ENST00000377819 A0A088AWK7 358 aa11□□□□□ -0.65
RTN3-206ENST00000377819 EIF3HO15372 352 aaKnown RBP eCLIP11□□□□□ -0.65
RTN3-206ENST00000377819 PRPF3O43395 683 aaKnown RBP11□□□□□ -0.65
RTN3-206ENST00000377819 CYP2E1P05181 493 aaPredicted RBP11□□□□□ -0.65
RTN3-206ENST00000377819 ZNF10P21506 573 aaPredicted RBP11□□□□□ -0.65
RTN3-206ENST00000377819 MDH1BQ5I0G3 518 aa11□□□□□ -0.65
RTN3-206ENST00000377819 RFFLQ8WZ73 363 aa11□□□□□ -0.65
RTN3-206ENST00000377819 SEC16BQ96JE7 1060 aa11□□□□□ -0.65
RTN3-206ENST00000377819 BTBD9Q96Q07 612 aa11□□□□□ -0.65
RTN3-206ENST00000377819 MNTQ99583 582 aa11□□□□□ -0.65
RTN3-206ENST00000377819 CINPQ9BW66 212 aaPredicted RBP11□□□□□ -0.65
RTN3-206ENST00000377819 ILKAPQ9H0C8 392 aaPredicted RBP11□□□□□ -0.65
RTN3-206ENST00000377819 CHST12Q9NRB3 414 aa11□□□□□ -0.65
RTN3-206ENST00000377819 RPS6KA6Q9UK32 745 aa11□□□□□ -0.65
RTN3-206ENST00000377819 PCDHGB3Q9Y5G1 929 aa11□□□□□ -0.65
RTN3-206ENST00000377819 USP32Q8NFA0 1604 aa11□□□□□ -0.65
RTN3-206ENST00000377819 SCAF11Q99590 1463 aaKnown RBP11□□□□□ -0.65
RTN3-206ENST00000377819 GRID2IPA4D2P6 1211 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 CYP27B1O15528 508 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 AGTP01019 485 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 FGRP09769 529 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 STAG3L1P0CL83 205 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 IL2P60568 153 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 FCHO2Q0JRZ9 810 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 SV2CQ496J9 727 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 ATP6AP1LQ52LC2 224 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 OLFML2AQ68BL7 652 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 ZNF746Q6NUN9 644 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms