RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 MON1AQ86VX9 555 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 ELOA2Q8IYF1 753 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 NELFBQ8WX92 580 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 FAM3CQ92520 227 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 USP13Q92995 863 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 SMARCD1Q96GM5 515 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 DHTKD1Q96HY7 919 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 C8orf48Q96LL4 319 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 MYRFLQ96LU7 910 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 LRRC3BQ96PB8 259 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 PHOX2BQ99453 314 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 TDP1Q9NUW8 608 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 SPATA6Q9NWH7 488 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 OBP2AQ9NY56 170 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 TRPM5Q9NZQ8 1165 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 ARMCX3Q9UH62 379 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 CCL26Q9Y258 94 aa12.3□□□□□ -0.44
SMARCE1-203ENST00000377808 TICRRQ7Z2Z1 1910 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 MUC6Q6W4X9 2439 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 C2orf78A6NCI8 922 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 NCAM2O15394 837 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 USP17L7P0C7H9 530 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 CD44P16070 742 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 TNK2Q07912 1038 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 ZNF394Q53GI3 561 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 UNC93AQ86WB7 457 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 ARL14EPQ8N8R7 260 aaPredicted RBP12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 FBXL13Q8NEE6 735 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 SLC2A14Q8TDB8 520 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 SEMA4DQ92854 862 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 JAKMIP2Q96AA8 810 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 CYP2S1Q96SQ9 504 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 KCNK16Q96T55 309 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 DDX23Q9BUQ8 820 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 NT5C1AQ9BXI3 368 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 DNAI2Q9GZS0 605 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 KIF9Q9HAQ2 790 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 DMAP1Q9NPF5 467 aaPredicted RBP12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 RAB20Q9NX57 234 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 GTSE1Q9NYZ3 720 aa12.29□□□□□ -0.44
SMARCE1-203ENST00000377808 MIA3Q5JRA6 1907 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 BICDL2A1A5D9 508 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 GLULP15104 373 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 HDCP19113 662 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 WEE1P30291 646 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 MRE11P49959 708 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 PDE6CP51160 858 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 MAP3K7CLP57077 242 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 PLCB2Q00722 1185 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 TAF10Q12962 218 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 PAK1Q13153 545 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 MORC3Q14149 939 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 CBWD6Q4V339 395 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 CBWD3Q5JTY5 395 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 CBWD5Q5RIA9 395 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 TRIM68Q6AZZ1 485 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 NUP93Q8N1F7 819 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 C12orf29Q8N999 325 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 FBXO32Q969P5 355 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 CEP295NLQ96MC4 621 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 SLITRK1Q96PX8 696 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 TWNKQ96RR1 684 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 SLC22A12Q96S37 553 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 NELL2Q99435 816 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 C8orf33Q9H7E9 229 aaPredicted RBP12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 CYP3A43Q9HB55 503 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 TRPV5Q9NQA5 729 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 TMEM30AQ9NV96 361 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 OBSL1O75147 1896 aa12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 ZNF638Q14966 1978 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-203ENST00000377808 SPECC1L-ADORA2AF8WAN1 911 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 ARNTLO00327 626 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 LAMTOR5O43504 91 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 RTN3O95197 1032 aaPredicted RBP12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 FAM200BP0CF97 657 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 BMP6P22004 513 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 PTPRDP23468 1912 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 YWHAQP27348 245 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 IFNAR2P48551 515 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 SLC5A3P53794 718 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 LRMPQ12912 555 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 MTF1Q14872 753 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 CREBRFQ8IUR6 639 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 C1orf210Q8IVY1 113 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 ZC3H3Q8IXZ2 948 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 FUKQ8N0W3 1084 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 CEP63Q96MT8 703 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 TTLL2Q9BWV7 592 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 OSBPL6Q9BZF3 934 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 NACA2Q9H009 215 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 EBF3Q9H4W6 596 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 METTL14Q9HCE5 456 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 GKN1Q9NS71 199 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 SMPD4Q9NXE4 827 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 DLGAP2Q9P1A6 1054 aa12.27□□□□□ -0.45
SMARCE1-203ENST00000377808 ZNF840PA6NDX5 716 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 SOBPA7XYQ1 873 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 PPP1R3GB7ZBB8 358 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 CILPO75339 1184 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 MBL2P11226 248 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms