RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 MON1BQ7L1V2 547 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 ZSCAN30Q86W11 494 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 PHF13Q86YI8 300 aaPredicted RBP13.67□□□□□ -0.22
CBWD3-203ENST00000377344 GPR65Q8IYL9 337 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 ATRIPQ8WXE1 791 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 EMILIN2Q9BXX0 1053 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 PRO3102Q9H379 93 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 RXFP1Q9HBX9 757 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 DMAP1Q9NPF5 467 aaPredicted RBP13.67□□□□□ -0.22
CBWD3-203ENST00000377344 TMEM30AQ9NV96 361 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 MYH10P35580 1976 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 CHD9Q3L8U1 2897 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 RCCD1A6NED2 376 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 USP27XA6NNY8 438 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 HIDE1A8MVS5 230 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 F8VP50 259 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 CCP110O43303 1012 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 LILRB3O75022 631 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 CALB1P05937 261 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 LCP1P13796 627 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 MMP8P22894 467 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 KLRC2P26717 231 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 IRS1P35568 1242 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 PLA2G4AP47712 749 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 GPC5P78333 572 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 C1QBPQ07021 282 aaKnown RBP13.67□□□□□ -0.22
CBWD3-203ENST00000377344 DUSP4Q13115 394 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 LIN9Q5TKA1 542 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 PIGZQ86VD9 579 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 CCAR2Q8N163 923 aaKnown RBP13.67□□□□□ -0.22
CBWD3-203ENST00000377344 TTC9BQ8N6N2 239 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 MRPL43Q8N983 215 aaKnown RBP13.67□□□□□ -0.22
CBWD3-203ENST00000377344 ZNF461Q8TAF7 563 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 GDPD5Q8WTR4 605 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 C2orf15Q8WU43 125 aaKnown RBP13.67□□□□□ -0.22
CBWD3-203ENST00000377344 C18orf8Q96DM3 657 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 TRIM11Q96F44 468 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 LACRTQ9GZZ8 138 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 ABCB6Q9NP58 842 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 NGRNQ9NPE2 291 aaKnown RBP13.67□□□□□ -0.22
CBWD3-203ENST00000377344 TJP2Q9UDY2 1190 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 CHORDC1Q9UHD1 332 aaPredicted RBP13.67□□□□□ -0.22
CBWD3-203ENST00000377344 CHD7Q9P2D1 2997 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 C2orf71A6NGG8 1288 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 E5RJQ4 531 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 SOAT2O75908 522 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 ERBB2P04626 1255 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 ADH1AP07327 375 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 TMEM253P0C7T8 217 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 ELF1P32519 619 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 NAP1L1P55209 391 aaKnown RBP13.66□□□□□ -0.22
CBWD3-203ENST00000377344 SNX16P57768 344 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 RAB33AQ14088 237 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 DDR2Q16832 855 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 TPGS2Q68CL5 300 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 VSTM1Q6UX27 236 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 ZMIZ2Q8NF64 920 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 STK32AQ8WU08 396 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 KLHL5Q96PQ7 755 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 MIS12Q9H081 205 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 CYP4F11Q9HBI6 524 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 LRRC4Q9HBW1 653 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 CSNK1G1Q9HCP0 422 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 TRIM10Q9UDY6 481 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 CNOT8Q9UFF9 292 aaKnown RBP13.66□□□□□ -0.22
CBWD3-203ENST00000377344 AFF4Q9UHB7 1163 aaKnown RBP13.66□□□□□ -0.22
CBWD3-203ENST00000377344 INTUQ9ULD6 942 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 STRIP2Q9ULQ0 834 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 GUCA1BQ9UMX6 200 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 IRAK3Q9Y616 596 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 DUSP10Q9Y6W6 482 aa13.66□□□□□ -0.22
CBWD3-203ENST00000377344 GOLGA8SH3BPF8 625 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 PRRG1O14668 218 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 TRIM66O15016 1216 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 KRT86O43790 486 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 ABLIM3O94929 683 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 VNN2O95498 520 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 SPATA31D3P0C874 917 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 MYBL1P10243 752 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 ATF2P15336 505 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 RRM1P23921 792 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 MAGEA11P43364 429 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 ACADSBP45954 432 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 GPR15P49685 360 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 IFRD2Q12894 506 aaPredicted RBP13.65□□□□□ -0.22
CBWD3-203ENST00000377344 CAMK1Q14012 370 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 SDHAF4Q5VUM1 108 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 OR6B2Q6IFH4 312 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 LLGL2Q6P1M3 1020 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 SPATA31D4Q6ZUB0 917 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 SIX6OS1Q8N1H7 587 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 ARHGEF26Q96DR7 871 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 VCPIP1Q96JH7 1222 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 HSFY1Q96LI6 401 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 SLC4A5Q9BY07 1137 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 TSGA10Q9BZW7 698 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 CRISPLD1Q9H336 500 aa13.65□□□□□ -0.22
CBWD3-203ENST00000377344 COLQQ9Y215 455 aaPredicted RBP13.65□□□□□ -0.22
CBWD3-203ENST00000377344 MACROD2A1Z1Q3 448 aa13.64□□□□□ -0.23
CBWD3-203ENST00000377344 EPOPA6NHQ4 379 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms