RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ZNF200P98182 395 aaPredicted RBP17.25■□□□□ 0.35
TRIM39-201ENST00000376656 BST1Q10588 318 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 C6orf163Q5TEZ5 329 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 TAS1R3Q7RTX0 852 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 RSAD2Q8WXG1 361 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 STK32BQ9NY57 414 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 TAGLN3Q9UI15 199 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 TCRBV5S1A1TA0A578 114 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 KBTBD13C9JR72 458 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 GARTP22102 1010 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 NLRP11P59045 1033 aaKnown RBP17.24■□□□□ 0.35
TRIM39-201ENST00000376656 BASP1P80723 227 aaKnown RBP17.24■□□□□ 0.35
TRIM39-201ENST00000376656 CFAP157Q5JU67 520 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 KCNT1Q5JUK3 1230 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 ZNF606Q8WXB4 792 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 MTBPQ96DY7 904 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 ACAP3Q96P50 834 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 ZWILCHQ9H900 591 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRIM39-201ENST00000376656 NUB1Q9Y5A7 615 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 KLRG2A4D1S0 409 aaPredicted RBP17.24■□□□□ 0.35
TRIM39-201ENST00000376656 COPEO14579 308 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 RANBP1P43487 201 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 ALDH18A1P54886 795 aaKnown RBP17.24■□□□□ 0.35
TRIM39-201ENST00000376656 PPP2R3CQ969Q6 453 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 NTPCRQ9BSD7 190 aaKnown RBP17.24■□□□□ 0.35
TRIM39-201ENST00000376656 MEI4A8MW99 385 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 KLF11O14901 512 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 PSMD6Q15008 389 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 LRRC36Q1X8D7 754 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 SAMD3Q8N6K7 520 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 DDX56Q9NY93 547 aaKnown RBP17.24■□□□□ 0.35
TRIM39-201ENST00000376656 CCPG1Q9ULG6 757 aa17.24■□□□□ 0.35
TRIM39-201ENST00000376656 PRR5-ARHGAP8B1AHC4 643 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 SPATA31D3P0C874 917 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 YWHAGP61981 247 aaKnown RBP eCLIP17.23■□□□□ 0.35
TRIM39-201ENST00000376656 CLDN10P78369 228 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 ARHGAP8P85298 464 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 TMPRSS15P98073 1019 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 SPATA31D4Q6ZUB0 917 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 FAM71DQ8N9W8 422 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 GSTCDQ8NEC7 633 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 CENPKQ9BS16 269 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 IQCGQ9H095 443 aaKnown RBP17.23■□□□□ 0.35
TRIM39-201ENST00000376656 ANKEF1Q9NU02 776 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 ZNF541Q9H0D2 1346 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 TRIM49D1C9J1S8 452 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 I3L4J1 428 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 POLRMTO00411 1230 aaKnown RBP17.23■□□□□ 0.35
TRIM39-201ENST00000376656 EXTL3O43909 919 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 AQP5P55064 265 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 LRRC23Q53EV4 343 aaPredicted RBP17.23■□□□□ 0.35
TRIM39-201ENST00000376656 CYP4A22Q5TCH4 519 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 MARK2Q7KZI7 788 aaKnown RBP17.23■□□□□ 0.35
TRIM39-201ENST00000376656 NIPA1Q7RTP0 329 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 CCDC106Q9BWC9 280 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 VCX3BQ9H321 246 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 VCX3AQ9NNX9 186 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 TCEAL9Q9UHQ7 104 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 CYB561D2O14569 222 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 NPM3O75607 178 aaKnown RBP17.23■□□□□ 0.35
TRIM39-201ENST00000376656 EIF2AK2P19525 551 aaKnown RBP17.23■□□□□ 0.35
TRIM39-201ENST00000376656 UBAP2LQ14157 1087 aaKnown RBP17.23■□□□□ 0.35
TRIM39-201ENST00000376656 FAM43BQ6ZT52 329 aaPredicted RBP17.23■□□□□ 0.35
TRIM39-201ENST00000376656 FAM81AQ8TBF8 368 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 TBC1D22BQ9NU19 505 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 SYNPO2Q9UMS6 1093 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 TBC1D30Q9Y2I9 924 aa17.23■□□□□ 0.35
TRIM39-201ENST00000376656 CD48P09326 243 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 MTMR2Q13614 643 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 DNAL1Q4LDG9 190 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 TMCO4Q5TGY1 634 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 PYDC1Q8WXC3 89 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 E2F7Q96AV8 911 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 CEP170P1Q96L14 293 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 C7orf26Q96N11 449 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 MRIQ9BWK5 157 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 GPAMQ9HCL2 828 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 DNAJB4Q9UDY4 337 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 RGPD3A6NKT7 1758 aaPredicted RBP17.22■□□□□ 0.35
TRIM39-201ENST00000376656 RGPD4Q7Z3J3 1758 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 AVILO75366 819 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 IL1R2P27930 398 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 STIP1P31948 543 aaKnown RBP17.22■□□□□ 0.35
TRIM39-201ENST00000376656 GRIA2P42262 883 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 PIGHQ14442 188 aaPredicted RBP17.22■□□□□ 0.35
TRIM39-201ENST00000376656 CHI3L2Q15782 390 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 DACT2Q5SW24 774 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 RNF111Q6ZNA4 994 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 HAPLN3Q96S86 360 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 C20orf27Q9GZN8 174 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 WWP1Q9H0M0 922 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 SLC4A7Q9Y6M7 1214 aa17.22■□□□□ 0.35
TRIM39-201ENST00000376656 SPDYE2BA6NHP3 402 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 CALB1P05937 261 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 SPDYE6P0CI01 402 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 HARSP12081 509 aaKnown RBP17.21■□□□□ 0.35
TRIM39-201ENST00000376656 PDE1BQ01064 536 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 SPDYE2Q495Y8 402 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 SFT2D3Q587I9 215 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms