RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 ASAP3Q8TDY4 903 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 SCYL1Q96KG9 808 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 ANKRD27Q96NW4 1050 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 MYOZ2Q9NPC6 264 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 USP18Q9UMW8 372 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 VWA5AO00534 786 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 HEATR6Q6AI08 1181 aaKnown RBP13.71□□□□□ -0.21
CUL4A-203ENST00000375441 SLC26A11Q86WA9 606 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 CCDC33Q8N5R6 958 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 SH3GL3Q99963 347 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 EBF2Q9HAK2 575 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 FBXO6Q9NRD1 293 aaPredicted RBP13.71□□□□□ -0.21
CUL4A-203ENST00000375441 GPATCH2LQ9NWQ4 482 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 PMM2O15305 246 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 MMP8P22894 467 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 RFC5P40937 340 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 PTGER2P43116 358 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 CDH8P55286 799 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 CCDC15Q0P6D6 951 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 PTP4A2Q12974 167 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 TCEAL1Q15170 157 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 LRRC38Q5VT99 294 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 OR6B3Q8NGW1 331 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 SHCBP1LQ9BZQ2 653 aa13.71□□□□□ -0.21
CUL4A-203ENST00000375441 C2CD2LO14523 706 aa13.71□□□□□ -0.22
CUL4A-203ENST00000375441 PRPF4O43172 522 aaKnown RBP eCLIP13.71□□□□□ -0.228e-9■■■■■ 29.1
CUL4A-203ENST00000375441 ZNF862O60290 1169 aa13.71□□□□□ -0.22
CUL4A-203ENST00000375441 TCEA3O75764 348 aa13.71□□□□□ -0.22
CUL4A-203ENST00000375441 CYP1A1P04798 512 aaPredicted RBP13.71□□□□□ -0.22
CUL4A-203ENST00000375441 ITGAVP06756 1048 aa13.71□□□□□ -0.22
CUL4A-203ENST00000375441 GPD1P21695 349 aa13.71□□□□□ -0.22
CUL4A-203ENST00000375441 AQP5P55064 265 aa13.71□□□□□ -0.22
CUL4A-203ENST00000375441 DNAL1Q4LDG9 190 aa13.71□□□□□ -0.22
CUL4A-203ENST00000375441 RAPH1Q70E73 1250 aa13.71□□□□□ -0.22
CUL4A-203ENST00000375441 FAM83AQ86UY5 434 aa13.71□□□□□ -0.22
CUL4A-203ENST00000375441 WDR49Q8IV35 697 aa13.71□□□□□ -0.22
CUL4A-203ENST00000375441 EXOC8Q8IYI6 725 aa13.71□□□□□ -0.22
CUL4A-203ENST00000375441 ST13P4Q8IZP2 240 aaPredicted RBP13.71□□□□□ -0.22
CUL4A-203ENST00000375441 SEPT1Q8WYJ6 367 aa13.71□□□□□ -0.22
CUL4A-203ENST00000375441 DDX1Q92499 740 aaKnown RBP13.71□□□□□ -0.22
CUL4A-203ENST00000375441 SMYD2Q9NRG4 433 aa13.71□□□□□ -0.22
CUL4A-203ENST00000375441 CFLARO15519 480 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 UPP2O95045 317 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 HSPA4LO95757 839 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 C4BPAP04003 597 aaKnown RBP13.7□□□□□ -0.22
CUL4A-203ENST00000375441 MYCNP04198 464 aaPredicted RBP13.7□□□□□ -0.22
CUL4A-203ENST00000375441 ZBTB41Q5SVQ8 909 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 ATF7IP2Q5U623 682 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 EP400NLQ6ZTU2 488 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 RASSF3Q86WH2 238 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 RFWD2Q8NHY2 731 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 AGR3Q8TD06 166 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 CLEC4DQ8WXI8 215 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 ZNF516Q92618 1163 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 E7ENQ6 273 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 KDELR1P24390 212 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 TYK2P29597 1187 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 MAP7D1Q3KQU3 841 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 RABGAP1LQ5R372 815 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 DENND1BQ6P3S1 775 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 RHBDF2Q6PJF5 856 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 CLNKQ7Z7G1 428 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 CDKL3Q8IVW4 592 aaPredicted RBP13.7□□□□□ -0.22
CUL4A-203ENST00000375441 ATXN7L3BQ96GX2 97 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 APOPT1Q96IL0 206 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 SRPK1Q96SB4 655 aaKnown RBP13.7□□□□□ -0.22
CUL4A-203ENST00000375441 HERPUD2Q9BSE4 406 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 FRMD8P1Q9BZ68 369 aaPredicted RBP13.7□□□□□ -0.22
CUL4A-203ENST00000375441 ACSS3Q9H6R3 686 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 STRCP1A6NGW2 1772 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 E2F8A0AVK6 867 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 PLA2G6O60733 806 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 KRT36O76013 467 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 ZCCHC18P0CG32 403 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 ACADSP16219 412 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 DPEP1P16444 411 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 CDK16Q00536 496 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 ASPHQ12797 758 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 DPYSL3Q14195 570 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 NLRP7Q8WX94 980 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 SCG3Q8WXD2 468 aaKnown RBP13.7□□□□□ -0.22
CUL4A-203ENST00000375441 RNF34Q969K3 372 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 OXNAD1Q96HP4 312 aaPredicted RBP13.7□□□□□ -0.22
CUL4A-203ENST00000375441 APOBEC3GQ9HC16 384 aaKnown RBP13.7□□□□□ -0.22
CUL4A-203ENST00000375441 VCX3AQ9NNX9 186 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 POLIQ9UNA4 740 aa13.7□□□□□ -0.22
CUL4A-203ENST00000375441 LOC100653049A0A140TA62 436 aa13.69□□□□□ -0.22
CUL4A-203ENST00000375441 FAM237BA0A1B0GVD1 139 aa13.69□□□□□ -0.22
CUL4A-203ENST00000375441 WNT10BO00744 389 aa13.69□□□□□ -0.22
CUL4A-203ENST00000375441 KRT34O76011 436 aa13.69□□□□□ -0.22
CUL4A-203ENST00000375441 ITGB3P05106 788 aa13.69□□□□□ -0.22
CUL4A-203ENST00000375441 TCF4P15884 667 aa13.69□□□□□ -0.22
CUL4A-203ENST00000375441 MIPP30301 263 aa13.69□□□□□ -0.22
CUL4A-203ENST00000375441 SLC34A1Q06495 639 aa13.69□□□□□ -0.22
CUL4A-203ENST00000375441 IFRD2Q12894 506 aaPredicted RBP13.69□□□□□ -0.22
CUL4A-203ENST00000375441 MXD4Q14582 209 aaPredicted RBP13.69□□□□□ -0.22
CUL4A-203ENST00000375441 SPDYE1Q8NFV5 336 aaPredicted RBP13.69□□□□□ -0.22
CUL4A-203ENST00000375441 CSADQ9Y600 493 aa13.69□□□□□ -0.22
CUL4A-203ENST00000375441 PPP1R12AO14974 1030 aaPredicted RBP13.69□□□□□ -0.22
CUL4A-203ENST00000375441 ALADP13716 330 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms