RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 NCALDP61601 193 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 YWHAGP61981 247 aaKnown RBP eCLIP17.87■□□□□ 0.45
RXRB-201ENST00000374680 MORF4L2Q15014 288 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 SESTD1Q86VW0 696 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 CFAP36Q96G28 342 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 PHTF1Q9UMS5 762 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 SNX9Q9Y5X1 595 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 PARP14Q460N5 1801 aa17.87■□□□□ 0.45
RXRB-201ENST00000374680 B4GALT4O60513 344 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 PDGFRBP09619 1106 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 CYP3A5P20815 502 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 ADRA1DP25100 572 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 IREB2P48200 963 aaKnown RBP17.86■□□□□ 0.45
RXRB-201ENST00000374680 ENPEPQ07075 957 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 XRCC4Q13426 336 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.86■□□□□ 0.45
RXRB-201ENST00000374680 KIF12Q96FN5 646 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 MAGEB18Q96M61 343 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 WDR83Q9BRX9 315 aaKnown RBP17.86■□□□□ 0.45
RXRB-201ENST00000374680 RNF181Q9P0P0 153 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 TSPAN16Q9UKR8 245 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 STRIP2Q9ULQ0 834 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 LCTP09848 1927 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 ALOX15BO15296 676 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 MED7O43513 233 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 HBP1O60381 514 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 KRT7P08729 469 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 RNASELQ05823 741 aaKnown RBP17.86■□□□□ 0.45
RXRB-201ENST00000374680 VSIG1Q86XK7 387 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 CTAGE3PQ8IX95 158 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 KIRREL3Q8IZU9 778 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 ZNF518BQ9C0D4 1074 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 PCDH9Q9HC56 1237 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 PIH1D1Q9NWS0 290 aaKnown RBP17.86■□□□□ 0.45
RXRB-201ENST00000374680 PCDHGC3Q9UN70 934 aa17.86■□□□□ 0.45
RXRB-201ENST00000374680 IGKV6-21A0A0C4DH24 114 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.85■□□□□ 0.45
RXRB-201ENST00000374680 ITGAVP06756 1048 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 KRT16P08779 473 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 TFE3P19532 575 aaPredicted RBP17.85■□□□□ 0.45
RXRB-201ENST00000374680 TTLL4Q14679 1199 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 SURF1Q15526 300 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 CCDC62Q6P9F0 684 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 ERP27Q96DN0 273 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 TACO1Q9BSH4 297 aaKnown RBP17.85■□□□□ 0.45
RXRB-201ENST00000374680 NOD2Q9HC29 1040 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 SLC17A7Q9P2U7 560 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 LGALS13Q9UHV8 139 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 SLC12A4Q9UP95 1085 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 DRG1Q9Y295 367 aaKnown RBP17.85■□□□□ 0.45
RXRB-201ENST00000374680 SYNJ2BP-COX16A0A087WUM0 186 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 MCF2LO15068 1137 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 CHUKO15111 745 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 PROZP22891 400 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 TARSP26639 723 aaKnown RBP17.85■□□□□ 0.45
RXRB-201ENST00000374680 ELK3P41970 407 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 GPD2P43304 727 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 KRT81Q14533 505 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 LRRC38Q5VT99 294 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 PPP1R21Q6ZMI0 780 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 FAM183BPQ6ZVS7 135 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 ILDR2Q71H61 639 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 ARMCX2Q7L311 632 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 LRRC8CQ8TDW0 803 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 NKD2Q969F2 451 aaPredicted RBP17.85■□□□□ 0.45
RXRB-201ENST00000374680 PAFAH2Q99487 392 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 ERAP1Q9NZ08 941 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 COX16Q9P0S2 106 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 C22orf31O95567 290 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 LGALS2P05162 132 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 GHRP10912 638 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 ARL4CP56559 192 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 TMEM132DQ14C87 1099 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 PDZD7Q9H5P4 517 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 NPHS2Q9NP85 383 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 RAB6BQ9NRW1 208 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 RABGEF1Q9UJ41 708 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 TNFSF13BQ9Y275 285 aa17.85■□□□□ 0.45
RXRB-201ENST00000374680 A0A0G2JLL6 359 aaPredicted RBP17.84■□□□□ 0.45
RXRB-201ENST00000374680 CILPO75339 1184 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 DNAJC8O75937 253 aaPredicted RBP17.84■□□□□ 0.45
RXRB-201ENST00000374680 ASMTLO95671 621 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 TRUB2O95900 331 aaKnown RBP17.84■□□□□ 0.45
RXRB-201ENST00000374680 SPARCL1Q14515 664 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 CA9Q16790 459 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 PLPPR4Q7Z2D5 763 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 PRRT2Q7Z6L0 340 aaPredicted RBP17.84■□□□□ 0.45
RXRB-201ENST00000374680 ERO1BQ86YB8 467 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 PPIL6Q8IXY8 311 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 P3H4Q92791 437 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 ETNK1Q9HBU6 452 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 DPP3Q9NY33 737 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 EURLQ9NYK6 297 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 KCNN4O15554 427 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 ATP6V1G2O95670 118 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 MSH2P43246 934 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 PHKA2P46019 1235 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 COPS2P61201 443 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 ACCSLQ4AC99 568 aa17.84■□□□□ 0.45
RXRB-201ENST00000374680 PPP1R26Q5T8A7 1209 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms