RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 SEPT10Q9P0V9 454 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 SH3PXD2BA1X283 911 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 SORBS3O60504 671 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 C6orf222P0C671 652 aaPredicted RBP10.63□□□□□ -0.71
CD28-202ENST00000374481 CTSWP56202 376 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 CCDC85BQ15834 202 aaPredicted RBP10.63□□□□□ -0.71
CD28-202ENST00000374481 DGUOKQ16854 277 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 NEK10Q6ZWH5 1172 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 MAPKAPK5Q8IW41 473 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 PLEKHO2Q8TD55 490 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 SEPT1Q8WYJ6 367 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 DLG3Q92796 817 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 SEL1LQ9UBV2 794 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 DNAJB4Q9UDY4 337 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 PCDHGA3Q9Y5H0 932 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 SNTNA6NMZ2 147 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 PSMD12O00232 456 aaPredicted RBP10.63□□□□□ -0.71
CD28-202ENST00000374481 IDO1P14902 403 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 PTGS2P35354 604 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 SERPINB9P50453 376 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 ACTR3P61158 418 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 SMAD1Q15797 465 aaKnown RBP10.63□□□□□ -0.71
CD28-202ENST00000374481 ZNF423Q2M1K9 1284 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 DNAAF3Q8N9W5 541 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 FBXL13Q8NEE6 735 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 PDCD6IPQ8WUM4 868 aaKnown RBP10.63□□□□□ -0.71
CD28-202ENST00000374481 OSCP1Q8WVF1 389 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 DHRS1Q96LJ7 313 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 POP1Q99575 1024 aaKnown RBP10.63□□□□□ -0.71
CD28-202ENST00000374481 DCLK3Q9C098 648 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 TMEM206Q9H813 350 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 ZC3H13Q5T200 1668 aaKnown RBP10.63□□□□□ -0.71
CD28-202ENST00000374481 PSMD11O00231 422 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 SLC16A3O15427 465 aaKnown RBP10.63□□□□□ -0.71
CD28-202ENST00000374481 DCXO43602 365 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 NMT2O60551 498 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 SNX2O60749 519 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 FGFR3P22607 806 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 FOXN2P32314 431 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 CHKAP35790 457 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 KPNA2P52292 529 aaKnown RBP10.63□□□□□ -0.71
CD28-202ENST00000374481 DLG1Q12959 904 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 ORC2Q13416 577 aaPredicted RBP10.63□□□□□ -0.71
CD28-202ENST00000374481 EARS2Q5JPH6 523 aaKnown RBP10.63□□□□□ -0.71
CD28-202ENST00000374481 C6orf52Q5T4I8 152 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 USP17L2Q6R6M4 530 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 POTEHQ6S545 545 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 TREML1Q86YW5 311 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 PPIL6Q8IXY8 311 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 NEDD1Q8NHV4 660 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 POMGNT1Q8WZA1 660 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 HES6Q96HZ4 224 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 APOPT1Q96IL0 206 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 OSBPL11Q9BXB4 747 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 BBS2Q9BXC9 721 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 ARMC7Q9H6L4 198 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 BARHL2Q9NY43 387 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 GTF3C4Q9UKN8 822 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 BCS1LQ9Y276 419 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 RWDD3Q9Y3V2 267 aa10.63□□□□□ -0.71
CD28-202ENST00000374481 EMSYQ7Z589 1322 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 BTNL10A8MVZ5 291 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 AREL1O15033 823 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 CCNKO75909 580 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 SRP72O76094 671 aaKnown RBP10.62□□□□□ -0.71
CD28-202ENST00000374481 ALOX12P18054 663 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 TFE3P19532 575 aaPredicted RBP10.62□□□□□ -0.71
CD28-202ENST00000374481 TAF5Q15542 800 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 WDR72Q3MJ13 1102 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 C11orf63Q6NUN7 778 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 ZSCAN18Q8TBC5 510 aaPredicted RBP10.62□□□□□ -0.71
CD28-202ENST00000374481 ACCSQ96QU6 501 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 EHD1Q9H4M9 534 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 DNAJC18Q9H819 358 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 ZNF510Q9Y2H8 683 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 ZHX2Q9Y6X8 837 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 PTPRMP28827 1452 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 ANKARQ7Z5J8 1434 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 EVPLLA8MZ36 301 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 PRR5-ARHGAP8B1AHC4 643 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 CCRL2O00421 344 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 GUCY1B2O75343 617 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 TDP2O95551 362 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 OXSR1O95747 527 aaPredicted RBP10.62□□□□□ -0.71
CD28-202ENST00000374481 TFPTP0C1Z6 253 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 MSL3P1P0C860 447 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 FUT4P22083 530 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 PSMA2P25787 234 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 PSMA4P25789 261 aaKnown RBP10.62□□□□□ -0.71
CD28-202ENST00000374481 ARHGAP8P85298 464 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 RELAQ04206 551 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 CHRNDQ07001 517 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 TFDP1Q14186 410 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 METTL21CQ5VZV1 264 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 VSTM1Q6UX27 236 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 ATG9AQ7Z3C6 839 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 CCDC60Q8IWA6 550 aaPredicted RBP10.62□□□□□ -0.71
CD28-202ENST00000374481 RCOR2Q8IZ40 523 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 CENPSQ8N2Z9 138 aa10.62□□□□□ -0.71
CD28-202ENST00000374481 BHLHE22Q8NFJ8 381 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms