RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 CELF3Q5SZQ8 465 aaKnown RBP16.32■□□□□ 0.2
TMEM50A-201ENST00000374358 MAP1SQ66K74 1059 aaPredicted RBP16.32■□□□□ 0.2
TMEM50A-201ENST00000374358 ASRGL1Q7L266 308 aa16.32■□□□□ 0.2
TMEM50A-201ENST00000374358 SPATA18Q8TC71 538 aa16.32■□□□□ 0.2
TMEM50A-201ENST00000374358 FZD8Q9H461 694 aa16.32■□□□□ 0.2
TMEM50A-201ENST00000374358 RPF1Q9H9Y2 349 aaKnown RBP16.32■□□□□ 0.2
TMEM50A-201ENST00000374358 SLC17A7Q9P2U7 560 aa16.32■□□□□ 0.2
TMEM50A-201ENST00000374358 USP18Q9UMW8 372 aa16.32■□□□□ 0.2
TMEM50A-201ENST00000374358 CNMDO75829 334 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 KRT7P08729 469 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 RBP3P10745 1247 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 POLR2BP30876 1174 aaKnown RBP16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 RNASELQ05823 741 aaKnown RBP16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 MOGSQ13724 837 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 ZNF268Q14587 947 aaPredicted RBP16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 PDK4Q16654 411 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 EFHC2Q5JST6 749 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 FAXCQ5TGI0 409 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 RNF43Q68DV7 783 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 ZNF449Q6P9G9 518 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 C12orf29Q8N999 325 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 LRRC8CQ8TDW0 803 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 UTP4Q969X6 686 aaKnown RBP16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 FAM167AQ96KS9 214 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 ARHGEF3Q9NR81 526 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 GPATCH2LQ9NWQ4 482 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 MCM8Q9UJA3 840 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 STAG3L1P0CL83 205 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 CYP3A5P20815 502 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 ARL4CP56559 192 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 HADHQ16836 314 aaKnown RBP16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 HHATQ5VTY9 493 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 KIRREL3Q8IZU9 778 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 CCDC33Q8N5R6 958 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 BCO2Q9BYV7 579 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 CXCL16Q9H2A7 254 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 RNF19AQ9NV58 838 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 HAO1Q9UJM8 370 aa16.31■□□□□ 0.2
TMEM50A-201ENST00000374358 EDF1O60869 148 aaKnown RBP16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 CBX6O95503 412 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 TGFB3P10600 412 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 RGS7P49802 495 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 GSCP56915 257 aaPredicted RBP16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 C1orf228Q6PIY5 440 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 OTOAQ7RTW8 1153 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 GBP7Q8N8V2 638 aaPredicted RBP16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 HEXIM2Q96MH2 286 aaKnown RBP16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 IFT122Q9HBG6 1241 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 NPHS2Q9NP85 383 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 TRIP11Q15643 1979 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 A0A087WZ62 844 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 UNC5CO95185 931 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 VTNP04004 478 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 MSH2P43246 934 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 CDH6P55285 790 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 ATP11AP98196 1134 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 NR1H3Q13133 447 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 PLEKHG4Q58EX7 1191 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 CEP128Q6ZU80 1094 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 ATP11CQ8NB49 1132 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 NLGN2Q8NFZ4 835 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 TCP10LQ8TDR4 215 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 PTPRN2Q92932 1015 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 NCAPGQ9BPX3 1015 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 FDXACB1Q9BRP7 624 aaPredicted RBP16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 ADPGKQ9BRR6 497 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 LHX5Q9H2C1 402 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 DCTN4Q9UJW0 460 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 STARD13Q9Y3M8 1113 aa16.3■□□□□ 0.2
TMEM50A-201ENST00000374358 CILPO75339 1184 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 EZRP15311 586 aaKnown RBP16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 CYP4V2Q6ZWL3 525 aaPredicted RBP16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 VSIG1Q86XK7 387 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 PALM2Q8IXS6 379 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 AGGF1Q8N302 714 aaeCLIP16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 CXorf38Q8TB03 319 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 TMEM176AQ96HP8 235 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 C2orf40Q9H1Z8 148 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 SMG5Q9UPR3 1016 aaKnown RBP16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 OTOFQ9HC10 1997 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 E5RJQ4 531 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 MED7O43513 233 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 LGR5O75473 907 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 TRUB2O95900 331 aaKnown RBP16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 TXNP10599 105 aaKnown RBP16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 SLC8A1P32418 973 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 ELK3P41970 407 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 GPD2P43304 727 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 ACVR2BQ13705 512 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 SURF1Q15526 300 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 MZB1Q8WU39 189 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 DCAKDQ8WVC6 231 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 ZNF75CPQ92670 426 aaPredicted RBP16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 TRIM56Q9BRZ2 755 aaKnown RBP16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 SLC24A2Q9UI40 661 aa16.29■□□□□ 0.2
TMEM50A-201ENST00000374358 APOC4-APOC2K7ER74 178 aa16.28■□□□□ 0.2
TMEM50A-201ENST00000374358 MCF2LO15068 1137 aa16.28■□□□□ 0.2
TMEM50A-201ENST00000374358 MAGEB2O15479 319 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms