RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 FBXO36Q8NEA4 188 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 COPAP53621 1224 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 SLC16A1P53985 500 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 TRIM65Q6PJ69 517 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 MIB1Q86YT6 1006 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 SLC11A2P49281 568 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 CLK1P49759 484 aaKnown RBP22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 MAPRE1Q15691 268 aaKnown RBP22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 GALNTL6Q49A17 601 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 UGT3A1Q6NUS8 523 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 SERPINB12Q96P63 405 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 SPHKAPQ2M3C7 1700 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 BCORL1Q5H9F3 1711 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 C2orf81A6NN90 581 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 NME5P56597 212 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 POLR1AO95602 1720 aaPredicted RBP22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 ASS1P00966 412 aaKnown RBP22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 IRAK1P51617 712 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 CLCN3P51790 818 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 ERVK-24P63145 666 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 RDM1Q8NG50 284 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 JADE3Q92613 823 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 OLFML2BQ68BL8 750 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 CCDC60Q8IWA6 550 aaPredicted RBP22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 LRRC34Q8IZ02 419 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 CNPY4Q8N129 248 aa22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 POP1Q99575 1024 aaKnown RBP22.96■■□□□ 1.27
TM9SF3-201ENST00000371142 VTNP04004 478 aa22.95■■□□□ 1.27
TM9SF3-201ENST00000371142 AGAP9Q5VTM2 703 aa22.95■■□□□ 1.27
TM9SF3-201ENST00000371142 CD44P16070 742 aaKnown RBP22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 FNTAP49354 379 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 MIER2Q8N344 545 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 PNKPQ96T60 521 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 PHTF1Q9UMS5 762 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 ENDOD1O94919 500 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 WLSQ5T9L3 541 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 ANKRD13AQ8IZ07 590 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 TUBGCP3Q96CW5 907 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 ILKAPQ9H0C8 392 aaPredicted RBP22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 A0A087X0T9 212 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 M0R3G1 203 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 FAM228BP0C875 321 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 CYP2C8P10632 490 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 ALOX15P16050 662 aaPredicted RBP22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 GLRBP48167 497 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 PAN2Q504Q3 1202 aaKnown RBP22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 DENND1BQ6P3S1 775 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 IARS2Q9NSE4 1012 aaKnown RBP22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 F5H5T6 163 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 F8W810 466 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 TP53BP2Q13625 1128 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 VPS72Q15906 364 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 STYK1Q6J9G0 422 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 TRIM48Q8IWZ4 208 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 PACSIN1Q9BY11 444 aa22.95■■□□□ 1.26
TM9SF3-201ENST00000371142 LRRIQ3A6PVS8 624 aaPredicted RBP22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 DAGLBQ8NCG7 672 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 ACER1Q8TDN7 264 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 EIF3LQ9Y262 564 aaKnown RBP22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 B3GAT3O94766 335 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 RFX3P48380 749 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 CDC16Q13042 620 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 MAPK7Q13164 816 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 OTOAQ7RTW8 1153 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 ARP10275 920 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 TFE3P19532 575 aaPredicted RBP22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 UNC45BQ8IWX7 931 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 CARNMT1Q8N4J0 409 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 SLC40A1Q9NP59 571 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 SCUBE2Q9NQ36 999 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 MRGBPQ9NV56 204 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 OGTO15294 1046 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 PBLDP30039 288 aaPredicted RBP22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 STIP1P31948 543 aaKnown RBP22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 PRIM2P49643 509 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 ALDH6A1Q02252 535 aaKnown RBP22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 RNF180Q86T96 592 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 CAB39Q9Y376 341 aaPredicted RBP22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 PXDNLA1KZ92 1463 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 ALBP02768 609 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 COL23A1Q86Y22 540 aaPredicted RBP22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 TEX9Q8N6V9 391 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 COLEC11Q9BWP8 271 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 C17orf75Q9HAS0 396 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 CHST12Q9NRB3 414 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 OLFML3Q9NRN5 406 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 DUSP10Q9Y6W6 482 aa22.94■■□□□ 1.26
TM9SF3-201ENST00000371142 H2AFYO75367 372 aaKnown RBP22.93■■□□□ 1.26
TM9SF3-201ENST00000371142 MUTP22033 750 aa22.93■■□□□ 1.26
TM9SF3-201ENST00000371142 CAAP1Q9H8G2 361 aa22.93■■□□□ 1.26
TM9SF3-201ENST00000371142 SPATA31A1Q5TZJ5 1347 aa22.93■■□□□ 1.26
TM9SF3-201ENST00000371142 ENO4A6NNW6 628 aa22.93■■□□□ 1.26
TM9SF3-201ENST00000371142 CYB561D2O14569 222 aa22.93■■□□□ 1.26
TM9SF3-201ENST00000371142 RFX5P48382 616 aaPredicted RBP22.93■■□□□ 1.26
TM9SF3-201ENST00000371142 KCTD17Q8N5Z5 321 aa22.93■■□□□ 1.26
TM9SF3-201ENST00000371142 HASPINQ8TF76 798 aa22.93■■□□□ 1.26
TM9SF3-201ENST00000371142 POLD3Q15054 466 aaPredicted RBP22.93■■□□□ 1.26
TM9SF3-201ENST00000371142 TTLL9Q3SXZ7 439 aa22.93■■□□□ 1.26
TM9SF3-201ENST00000371142 MRNIPQ6NTE8 343 aa22.93■■□□□ 1.26
TM9SF3-201ENST00000371142 FAM172AQ8WUF8 416 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms