RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 ZUFSPQ96AP4 578 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 RRP36Q96EU6 259 aaKnown RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 DYNLL2Q96FJ2 89 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 CABS1Q96KC9 395 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 TCF25Q9BQ70 676 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 STK33Q9BYT3 514 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 GSX2Q9BZM3 304 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 RNPEPQ9H4A4 650 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 HOMER3Q9NSC5 361 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 KCND2Q9NZV8 630 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 ZNF624Q9P2J8 865 aaPredicted RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 PCDHAC2Q9Y5I4 1007 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 TLL2Q9Y6L7 1015 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 BACH1O14867 736 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 PSMD10O75832 226 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 INHAP05111 366 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 QDPRP09417 244 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 PFKFB1P16118 471 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 ACAA2P42765 397 aaKnown RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 PNLIPRP1P54315 467 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 RTP1P59025 263 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 CCDC142Q17RM4 750 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 TYSND1Q2T9J0 566 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 CCDC38Q502W7 563 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 SEZ6Q53EL9 994 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 FKBP15Q5T1M5 1219 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 TMCO3Q6UWJ1 677 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 TSPYL5Q86VY4 417 aaPredicted RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 KRT73Q86Y46 540 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 ADGRF4Q8IZF3 695 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 GALNT15Q8N3T1 639 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 ARL14Q8N4G2 192 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 USP6NLQ92738 828 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 EID2BQ96D98 161 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 DNAJC19Q96DA6 116 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 KLRG1Q96E93 195 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 MAELQ96JY0 434 aaKnown RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 TEKT5Q96M29 485 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 C1QTNF2Q9BXJ5 285 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 ZC3H12CQ9C0D7 883 aaKnown RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 TNMDQ9H2S6 317 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 ZWILCHQ9H900 591 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 VEZTQ9HBM0 779 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 INTS13Q9NVM9 706 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 NINJ2Q9NZG7 142 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 IMPACTQ9P2X3 320 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 STK39Q9UEW8 545 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 ALPK3Q96L96 1907 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 TRBV23-1A0A0A0MS06 115 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 PVALEFA0A1B0GWK0 134 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 EML1O00423 815 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 CXCL11O14625 94 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 TLL1O43897 1013 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 PLGP00747 810 aaPredicted RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 ICAM1P05362 532 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 THP07101 528 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 TXNP10599 105 aaKnown RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 PCNAP12004 261 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 TMEM11P17152 192 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 LSSP48449 732 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 PSEN2P49810 448 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 NDUFA8P51970 172 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 FKBP1BP68106 108 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 PPP1R7Q15435 360 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 INF2Q27J81 1249 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 MPEG1Q2M385 716 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 SHEQ5VZ18 495 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 TRIM68Q6AZZ1 485 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 GPAT2Q6NUI2 795 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 TTC39CQ8N584 583 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 SHCBP1Q8NEM2 672 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 CHTF18Q8WVB6 975 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 TMEM40Q8WWA1 233 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 CCDC114Q96M63 670 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 KRT82Q9NSB4 513 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 IL1RAPL1Q9NZN1 696 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 STK17AQ9UEE5 414 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 PTBP2Q9UKA9 531 aaKnown RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 CCL27Q9Y4X3 112 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 PCDHGB2Q9Y5G2 931 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 PCDHGA5Q9Y5G8 931 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 PCDHGA1Q9Y5H4 931 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 ZNF106Q9H2Y7 1883 aaKnown RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 PLXNA4Q9HCM2 1894 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 A0A1B0GTH6 734 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 LRRC14BA6NHZ5 514 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 STAMBPO95630 424 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 CYP11B2P19099 503 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 TCF7P36402 384 aaPredicted RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 PPP1R2P41236 205 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 ATP5OP48047 213 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 ADARP55265 1226 aaKnown RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 SNRPFP62306 86 aaKnown RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 VAMP2P63027 116 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 TRAF1Q13077 416 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 DENND5AQ6IQ26 1287 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 RAB11FIP2Q7L804 512 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 ZNF572Q7Z3I7 529 aaPredicted RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 ERO1BQ86YB8 467 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 IRF2BP1Q8IU81 584 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms