RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 LPCAT2Q7L5N7 544 aa16.51■□□□□ 0.23
SSR4-204ENST00000370087 FILIP1Q7Z7B0 1213 aa16.51■□□□□ 0.23
SSR4-204ENST00000370087 OR2I1PQ8NGU4 316 aa16.51■□□□□ 0.23
SSR4-204ENST00000370087 PLCG1P19174 1290 aa16.5■□□□□ 0.23
SSR4-204ENST00000370087 SCP2P22307 547 aa16.5■□□□□ 0.23
SSR4-204ENST00000370087 ITPKAP23677 461 aa16.5■□□□□ 0.23
SSR4-204ENST00000370087 TFAMQ00059 246 aaKnown RBP16.5■□□□□ 0.23
SSR4-204ENST00000370087 KDSRQ06136 332 aa16.5■□□□□ 0.23
SSR4-204ENST00000370087 KCNA1Q09470 495 aa16.5■□□□□ 0.23
SSR4-204ENST00000370087 NR1H3Q13133 447 aa16.5■□□□□ 0.23
SSR4-204ENST00000370087 CFAP221Q4G0U5 840 aa16.5■□□□□ 0.23
SSR4-204ENST00000370087 PEAR1Q5VY43 1037 aaPredicted RBP16.5■□□□□ 0.23
SSR4-204ENST00000370087 SPATA2LQ8IUW3 424 aaPredicted RBP16.5■□□□□ 0.23
SSR4-204ENST00000370087 SYT12Q8IV01 421 aa16.5■□□□□ 0.23
SSR4-204ENST00000370087 DEFB119Q8N690 84 aa16.5■□□□□ 0.23
SSR4-204ENST00000370087 POMGNT1Q8WZA1 660 aa16.5■□□□□ 0.23
SSR4-204ENST00000370087 RAD54LQ92698 747 aa16.5■□□□□ 0.23
SSR4-204ENST00000370087 SAAL1Q96ER3 474 aa16.5■□□□□ 0.23
SSR4-204ENST00000370087 NUSAP1Q9BXS6 441 aaKnown RBP16.5■□□□□ 0.23
SSR4-204ENST00000370087 SIX4Q9UIU6 781 aa16.5■□□□□ 0.23
SSR4-204ENST00000370087 PILRBQ9UKJ0 227 aa16.5■□□□□ 0.23
SSR4-204ENST00000370087 PLXNB3Q9ULL4 1909 aa16.5■□□□□ 0.23
SSR4-204ENST00000370087 TULP1O00294 542 aaPredicted RBP16.49■□□□□ 0.23
SSR4-204ENST00000370087 TBCAO75347 108 aaKnown RBP16.49■□□□□ 0.23
SSR4-204ENST00000370087 PPP1R37O75864 691 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 IL18RAPO95256 599 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 KRT18P05783 430 aaKnown RBP16.49■□□□□ 0.23
SSR4-204ENST00000370087 PNPLA4P41247 253 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 KIR2DL1P43626 348 aaPredicted RBP16.49■□□□□ 0.23
SSR4-204ENST00000370087 PSMC1P62191 440 aaKnown RBP16.49■□□□□ 0.23
SSR4-204ENST00000370087 MRPS21P82921 87 aaKnown RBP16.49■□□□□ 0.23
SSR4-204ENST00000370087 MYL7Q01449 175 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 RILPL1Q5EBL4 403 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 LYSMD4Q5XG99 296 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 MCTP1Q6DN14 999 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 SLFN12LQ6IEE8 588 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 SLC23A3Q6PIS1 610 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 SFR1Q86XK3 245 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 ADGRF2Q8IZF7 708 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 CHCHD4Q8N4Q1 142 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 WHAMMQ8TF30 809 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 HMGB4Q8WW32 186 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 MYLPFQ96A32 169 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 FAM213AQ9BRX8 229 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 RNF38Q9H0F5 515 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 ST6GALNAC4Q9H4F1 302 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 SLC32A1Q9H598 525 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 SNX9Q9Y5X1 595 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 GON4LQ3T8J9 2241 aa16.49■□□□□ 0.23
SSR4-204ENST00000370087 MYO18AQ92614 2054 aaKnown RBP16.49■□□□□ 0.23
SSR4-204ENST00000370087 GABRDO14764 452 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 MAP3K13O43283 966 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 HUS1O60921 280 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 KAT7O95251 611 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 CFIP05156 583 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 DHCR24Q15392 516 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 SOWAHAQ2M3V2 549 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 ARL6IP4Q66PJ3 421 aaKnown RBP16.48■□□□□ 0.23
SSR4-204ENST00000370087 FAM171BQ6P995 826 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 BRSK2Q8IWQ3 736 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 TMEM86AQ8N2M4 240 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 PHTF2Q8N3S3 785 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 FSIP1Q8NA03 581 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 CCDC26Q8TAB7 109 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 KBTBD7Q8WVZ9 684 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 SPACA7Q96KW9 195 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 KIF2CQ99661 725 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 GTPBP2Q9BX10 602 aaKnown RBP16.48■□□□□ 0.23
SSR4-204ENST00000370087 STRA6Q9BX79 667 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 CRTAC1Q9NQ79 661 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 SMPD4Q9NXE4 827 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 GDAP2Q9NXN4 497 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 BCCIPQ9P287 314 aaKnown RBP eCLIP16.48■□□□□ 0.23
SSR4-204ENST00000370087 CPQQ9Y646 472 aa16.48■□□□□ 0.23
SSR4-204ENST00000370087 PTPRJQ12913 1337 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 IGSF10Q6WRI0 2623 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 TCRBV21S2A2A0A5A6 115 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 UPK3BL1B0FP48 263 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 UPK3BL2E5RIL1 263 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 ALDH1A2O94788 518 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 BDNFP23560 247 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 LMO2P25791 158 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 MAGEA11P43364 429 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 POU5F1Q01860 360 aaKnown RBP16.47■□□□□ 0.23
SSR4-204ENST00000370087 RHBDF2Q6PJF5 856 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 C19orf48Q6RUI8 117 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 RAB44Q7Z6P3 723 aaPredicted RBP16.47■□□□□ 0.23
SSR4-204ENST00000370087 PROSER1Q86XN7 944 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 NT5DC4Q86YG4 428 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 ADGRG2Q8IZP9 1017 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 CSGALNACT2Q8N6G5 542 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 LRRC52Q8N7C0 313 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 SPATA18Q8TC71 538 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 CALML4Q96GE6 196 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 FUBP3Q96I24 572 aaKnown RBP eCLIP16.47■□□□□ 0.23
SSR4-204ENST00000370087 ZSCAN31Q96LW9 406 aaPredicted RBP16.47■□□□□ 0.23
SSR4-204ENST00000370087 CAMK1GQ96NX5 476 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 PNKPQ96T60 521 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 MTMR12Q9C0I1 747 aa16.47■□□□□ 0.23
SSR4-204ENST00000370087 CAPN10Q9HC96 672 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms