RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 DNAJB7Q7Z6W7 309 aaPredicted RBP16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 TTC30AQ86WT1 665 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 ZMIZ2Q8NF64 920 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 TRMT2BQ96GJ1 504 aaKnown RBP16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 KCNK16Q96T55 309 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 AVENQ9NQS1 362 aaPredicted RBP16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 ASAH2Q9NR71 780 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 TMEM30AQ9NV96 361 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 THEGQ9P2T0 379 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 UXTQ9UBK9 157 aaPredicted RBP16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 LUC7L2Q9Y383 392 aaKnown RBP16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 LRRC53A6NM62 1247 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 SLC38A8A6NNN8 435 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 XPO1O14980 1071 aaKnown RBP16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 BEST1O76090 585 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 MICAL2O94851 1124 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 RTN3O95197 1032 aaPredicted RBP16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 GYPCP04921 128 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 KRT9P35527 623 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 EPHA5P54756 1037 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 CLUL1Q15846 466 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 CYP4A22Q5TCH4 519 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 SFMBT2Q5VUG0 894 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 NUP93Q8N1F7 819 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 EPS8L1Q8TE68 723 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 GIPC2Q8TF65 315 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 SUSD6Q92537 303 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 SYN2Q92777 582 aaPredicted RBP16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 MYRFLQ96LU7 910 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 APOL5Q9BWW9 433 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 WDR6Q9NNW5 1121 aaKnown RBP16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 ACP6Q9NPH0 428 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 AIPL1Q9NZN9 384 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 DNMT3BQ9UBC3 853 aaKnown RBP16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 M0QYV0 167 aa16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 ZNF197O14709 1029 aa16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 MBTPS2O43462 519 aa16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 RHOP08100 348 aa16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 PLA2G4AP47712 749 aa16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 PDE4CQ08493 712 aa16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 CBX2Q14781 532 aaPredicted RBP16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 PABPC1LQ4VXU2 614 aaKnown RBP16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 SDHAF4Q5VUM1 108 aa16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 PDZD4Q76G19 769 aaPredicted RBP16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 GRASPQ7Z6J2 395 aaPredicted RBP16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 GPR152Q8TDT2 470 aa16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 CORO1BQ9BR76 489 aa16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 LHX5Q9H2C1 402 aa16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 FBXO44Q9H4M3 255 aa16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 USP15Q9Y4E8 981 aaPredicted RBP16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 CEP83Q9Y592 693 aa16.42■□□□□ 0.22
PRPF38B-202ENST00000370022 GOLGA6L3A6NEY3 463 aa16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 TNFRSF10BO14763 440 aa16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 CALCAP01258 141 aa16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 HMGA1P17096 107 aaKnown RBP16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 CASP14P31944 242 aa16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 SLC5A3P53794 718 aa16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 CDR2Q01850 454 aa16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 NOP9Q86U38 636 aaKnown RBP16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 PIGZQ86VD9 579 aa16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 UBA3Q8TBC4 463 aa16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 STK32AQ8WU08 396 aa16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 SLC35F5Q8WV83 523 aa16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 ATXN2LQ8WWM7 1075 aaKnown RBP16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 KCTD13Q8WZ19 329 aa16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 DDX1Q92499 740 aaKnown RBP16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 SECISBP2LQ93073 1101 aaKnown RBP16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 TTLL2Q9BWV7 592 aa16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 LRRC3Q9BY71 257 aa16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 PDCL3Q9H2J4 239 aa16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 NOCTQ9UK39 431 aaKnown RBP16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 CLUHO75153 1309 aa16.41■□□□□ 0.22
PRPF38B-202ENST00000370022 GRXCR2A6NFK2 248 aa16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 HHLA1C9JL84 531 aa16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 LSM8O95777 96 aaKnown RBP16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 CDC25CP30307 473 aa16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 GPD2P43304 727 aa16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 PPP3CCP48454 512 aa16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 ARID5AQ03989 594 aa16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 ASIC2Q16515 512 aa16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 PTCRAQ6ISU1 281 aaPredicted RBP16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 IRF2BP2Q7Z5L9 587 aa16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 TMC8Q8IU68 726 aa16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 CPLX3Q8WVH0 158 aa16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 HSFY1Q96LI6 401 aa16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 PRDM6Q9NQX0 595 aa16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 HCFC1R1Q9NWW0 138 aa16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 IL37Q9NZH6 218 aa16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 MAGED2Q9UNF1 606 aaPredicted RBP16.4■□□□□ 0.22
PRPF38B-202ENST00000370022 FAM92AA1XBS5 289 aa16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 YWHAQP27348 245 aa16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 CDC25BP30305 580 aa16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 PRKCIP41743 596 aa16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 SMAD2Q15796 467 aaKnown RBP16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 RAB41Q5JT25 222 aa16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 DENND1BQ6P3S1 775 aa16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 TRIM72Q6ZMU5 477 aa16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 TMC6Q7Z403 805 aa16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 CNGA4Q8IV77 575 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms