RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 EFR3AQ14156 821 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 LLGL1Q15334 1064 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 AADACL4Q5VUY2 407 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 TYW1BQ6NUM6 668 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 SLC30A6Q6NXT4 461 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 C4orf50Q6ZRC1 276 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 EHBP1Q8NDI1 1231 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 RASGRP4Q8TDF6 673 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ZNF566Q969W8 418 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 PHACTR3Q96KR7 559 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 NIF3L1Q9GZT8 377 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ASCC2Q9H1I8 757 aaPredicted RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 SYNDIG1Q9H7V2 258 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 GLRX2Q9NS18 164 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 KBTBD4Q9NVX7 518 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 LARSQ9P2J5 1176 aaKnown RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 AASSQ9UDR5 926 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 PLAAQ9Y263 795 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 GBF1Q92538 1859 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ZNF536O15090 1300 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 DPPA5A6NC42 116 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 FOXO6A8MYZ6 492 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ARHGAP6O43182 974 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 IRAK2O43187 625 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 RFPL1O75677 317 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 POU2F2P09086 479 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ACADSP16219 412 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 RPS6KB1P23443 525 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 GUCY1A2P33402 732 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ETV3P41162 512 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 DR1Q01658 176 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 RUNX1T1Q06455 604 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 SPARCL1Q14515 664 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 SMAD2Q15796 467 aaKnown RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 MAPKAPK3Q16644 382 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 DDR2Q16832 855 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ZNF674Q2M3X9 581 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 NAA35Q5VZE5 725 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 HAUS3Q68CZ6 603 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 PHLDB2Q86SQ0 1253 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 FOXP4Q8IVH2 680 aaPredicted RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ANKRD53Q8N9V6 530 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 OTUD7AQ8TE49 926 aaPredicted RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 RAPGEF5Q92565 580 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 KRT35Q92764 455 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 NINJ1Q92982 152 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 IQCDQ96DY2 449 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 VCPIP1Q96JH7 1222 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 MYD88Q99836 296 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 SENP6Q9GZR1 1112 aaPredicted RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 VPS11Q9H270 941 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 WDR6Q9NNW5 1121 aaKnown RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 MTRF1LQ9UGC7 380 aaKnown RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 MRPL11Q9Y3B7 192 aaKnown RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 SNX8Q9Y5X2 465 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 CDK5RAP2Q96SN8 1893 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ARHGAP10A1A4S6 786 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 LOC730098B7Z3J9 87 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 E9PMD0 336 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ARVCFO00192 962 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 SPTLC1O15269 473 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 EXTL3O43909 919 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 DUSP11O75319 330 aaKnown RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 C1RP00736 705 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ASNSP08243 561 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 AKR1A1P14550 325 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 VAV1P15498 845 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ATP5F1P24539 256 aaPredicted RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ACADSBP45954 432 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 CLCN5P51795 746 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ATN1P54259 1190 aaPredicted RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 AK2P54819 239 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 SLC26A5P58743 744 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 DCAF7P61962 342 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 PLOD1Q02809 727 aaPredicted RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 FAAP100Q0VG06 881 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 TCF15Q12870 199 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 MSLNQ13421 630 aaPredicted RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ADAM9Q13443 819 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 TRIM60Q495X7 471 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ACCSLQ4AC99 568 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ANO6Q4KMQ2 910 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 MFSD14BQ5SR56 506 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 NDUFAF5Q5TEU4 345 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 TRIM67Q6ZTA4 783 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ZNF598Q86UK7 904 aaKnown RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 TMTC1Q8IUR5 882 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ZNF565Q8N9K5 539 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 TTC13Q8NBP0 860 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ST13P5Q8NFI4 369 aaPredicted RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 TPCN2Q8NHX9 752 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ZNF473Q8WTR7 871 aaKnown RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 BSNDQ8WZ55 320 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 KIAA1191Q96A73 305 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 TMIGD2Q96BF3 282 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 EFHD2Q96C19 240 aaPredicted RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 INTS12Q96CB8 462 aaKnown RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 STAMBPL1Q96FJ0 436 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 VPS39Q96JC1 886 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms