RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 LACTBL1A8MY62 500 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 DDX3XO00571 662 aaKnown RBP eCLIP9.34□□□□□ -0.91
SNX27-201ENST00000368838 NARSO43776 548 aaKnown RBP9.34□□□□□ -0.91
SNX27-201ENST00000368838 CST3P01034 146 aaPredicted RBP9.34□□□□□ -0.91
SNX27-201ENST00000368838 SOD2P04179 222 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 PLEKP08567 350 aaPredicted RBP9.34□□□□□ -0.91
SNX27-201ENST00000368838 PAEPP09466 180 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 CXCL8P10145 99 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 P4HA1P13674 534 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 CYP11B1P15538 503 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 CDH5P33151 784 aaPredicted RBP9.34□□□□□ -0.91
SNX27-201ENST00000368838 PIK3CAP42336 1068 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 GLUD2P49448 558 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 RBP5P82980 135 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 CDR2Q01850 454 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 INCA1Q0VD86 236 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 BIRC3Q13489 604 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 TDRD12Q587J7 1177 aaKnown RBP9.34□□□□□ -0.91
SNX27-201ENST00000368838 CCDC149Q6ZUS6 474 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 GPR149Q86SP6 731 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 PPM1KQ8N3J5 372 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 C1orf127Q8N9H9 656 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 FLCNQ8NFG4 579 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 RPS6KC1Q96S38 1066 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 KCNK17Q96T54 332 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 AGPAT1Q99943 283 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 PAAF1Q9BRP4 392 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 HERC2P3Q9BVR0 1158 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 MFSD1Q9H3U5 465 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 APOBEC3GQ9HC16 384 aaKnown RBP9.34□□□□□ -0.91
SNX27-201ENST00000368838 SLC38A7Q9NVC3 462 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 GDAP2Q9NXN4 497 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 PARP2Q9UGN5 583 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 GIT1Q9Y2X7 761 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 FANCMQ8IYD8 2048 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 WDR87Q6ZQQ6 2873 aa9.34□□□□□ -0.91
SNX27-201ENST00000368838 CCDC195A0A1B0GUA6 201 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 PIRO00625 290 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 GFRA3O60609 400 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 PHACTR2O75167 634 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 CYP1A1P04798 512 aaPredicted RBP9.33□□□□□ -0.92
SNX27-201ENST00000368838 H2AFZP0C0S5 128 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 TMEM253P0C7T8 217 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 GBP2P32456 591 aaPredicted RBP9.33□□□□□ -0.92
SNX27-201ENST00000368838 APBA1Q02410 837 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 TRPC3Q13507 836 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 TMEM132DQ14C87 1099 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 CCDC122Q5T0U0 273 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 KIAA0319Q5VV43 1072 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 PAPD7Q5XG87 772 aaKnown RBP9.33□□□□□ -0.92
SNX27-201ENST00000368838 JADE1Q6IE81 842 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 GJB7Q6PEY0 223 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 PRSS55Q6UWB4 352 aaPredicted RBP9.33□□□□□ -0.92
SNX27-201ENST00000368838 H2AFVQ71UI9 128 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 UNC93AQ86WB7 457 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 UBALD2Q8IYN6 164 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 ZDHHC14Q8IZN3 488 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 C17orf53Q8N3J3 647 aaPredicted RBP9.33□□□□□ -0.92
SNX27-201ENST00000368838 ACRBPQ8NEB7 543 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 GSTCDQ8NEC7 633 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 BEST2Q8NFU1 509 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 ACSF2Q96CM8 615 aaPredicted RBP9.33□□□□□ -0.92
SNX27-201ENST00000368838 C16orf45Q96MC5 204 aaPredicted RBP9.33□□□□□ -0.92
SNX27-201ENST00000368838 DESI2Q9BSY9 194 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 GPR62Q9BZJ7 368 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 MTMR12Q9C0I1 747 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 LACRTQ9GZZ8 138 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 TRMT1Q9NXH9 659 aaKnown RBP9.33□□□□□ -0.92
SNX27-201ENST00000368838 KANSL3Q9P2N6 904 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 LCMT1Q9UIC8 334 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 SIX4Q9UIU6 781 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 NUB1Q9Y5A7 615 aa9.33□□□□□ -0.92
SNX27-201ENST00000368838 KIF26AQ9ULI4 1882 aaPredicted RBP9.33□□□□□ -0.92
SNX27-201ENST00000368838 CASTOR2A6NHX0 329 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 CES2O00748 559 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 NCANO14594 1321 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 PI15O43692 258 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 RTN2O75298 545 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 LRRN2O75325 713 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 TACC1O75410 805 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 LSM8O95777 96 aaKnown RBP9.32□□□□□ -0.92
SNX27-201ENST00000368838 GLUD1P00367 558 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 ADH1AP07327 375 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 CFHP08603 1231 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 MYBL1P10243 752 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 UNGP13051 313 aaPredicted RBP9.32□□□□□ -0.92
SNX27-201ENST00000368838 TNFAIP3P21580 790 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 IGFBP6P24592 240 aaPredicted RBP9.32□□□□□ -0.92
SNX27-201ENST00000368838 ASPAP45381 313 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 PDE6CP51160 858 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 GSCP56915 257 aaPredicted RBP9.32□□□□□ -0.92
SNX27-201ENST00000368838 GNG11P61952 73 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 TFAMQ00059 246 aaKnown RBP9.32□□□□□ -0.92
SNX27-201ENST00000368838 GFPT1Q06210 699 aaPredicted RBP9.32□□□□□ -0.92
SNX27-201ENST00000368838 DSC1Q08554 894 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 STILQ15468 1287 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 ZNF667Q5HYK9 610 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 CWF19L1Q69YN2 538 aaKnown RBP9.32□□□□□ -0.92
SNX27-201ENST00000368838 FUT10Q6P4F1 479 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 SLFN11Q7Z7L1 901 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms