RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 UCHL3P15374 230 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 GRIA2P42262 883 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 MXI1P50539 228 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 CLCN3P51790 818 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 ZP2Q05996 745 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 CYP24A1Q07973 514 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 GRIK4Q16099 956 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 CBWD6Q4V339 395 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 CBWD3Q5JTY5 395 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 CBWD5Q5RIA9 395 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 PRAMEF19Q5SWL8 479 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 SFMBT2Q5VUG0 894 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 MTHFD1LQ6UB35 978 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 DGLUCYQ7Z3D6 616 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 CBWD2Q8IUF1 395 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 SCUBE1Q8IWY4 988 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 CHPFQ8IZ52 775 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 MAP7D2Q96T17 732 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 TMEM8AQ9HCN3 771 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 AGO2Q9UKV8 859 aaKnown RBP9.38□□□□□ -0.91
TPM3-213ENST00000368545 NRCAMQ92823 1304 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 SSU72P8A0A1W2PR75 194 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 SOBPA7XYQ1 873 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 DUSP11O75319 330 aaKnown RBP9.37□□□□□ -0.91
TPM3-213ENST00000368545 TOM1L1O75674 476 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 CD4P01730 458 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 ADRB2P07550 413 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 SRGAP2CP0DJJ0 459 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 TNNT1P13805 278 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 SLC9A1P19634 815 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 PTENP60484 403 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 KRT83P78385 493 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 CDC42EP1Q00587 391 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 ITKQ08881 620 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 MTF1Q14872 753 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 SYCP2LQ5T4T6 812 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 REXO1L1PQ8IX06 675 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 FAM126BQ8IXS8 530 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.37□□□□□ -0.91
TPM3-213ENST00000368545 PARD3BQ8TEW8 1205 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 GTPBP3Q969Y2 492 aaKnown RBP9.37□□□□□ -0.91
TPM3-213ENST00000368545 ELMO3Q96BJ8 720 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 CCDC42Q96M95 316 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 NLRP4Q96MN2 994 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 SPAG5Q96R06 1193 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 NHEJ1Q9H9Q4 299 aaPredicted RBP9.37□□□□□ -0.91
TPM3-213ENST00000368545 NLRC4Q9NPP4 1024 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 PRMT7Q9NVM4 692 aaPredicted RBP9.37□□□□□ -0.91
TPM3-213ENST00000368545 AIPL1Q9NZN9 384 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 EPN1Q9Y6I3 576 aaPredicted RBP9.37□□□□□ -0.91
TPM3-213ENST00000368545 A0A0B4J269 797 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 PRAMEF27A3QJZ7 478 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 GOLGA8IPA6NC78 632 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 GOLGA8JA6NMD2 632 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 EIF3CLB5ME19 914 aaKnown RBP9.37□□□□□ -0.91
TPM3-213ENST00000368545 ACKR2O00590 384 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 CLDN3O15551 220 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 KPNA6O60684 536 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 ADAMTS4O75173 837 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 SERPING1P05155 500 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 CPEP16870 476 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 MATR3P43243 847 aaKnown RBP eCLIP9.37□□□□□ -0.91
TPM3-213ENST00000368545 RAPGEF1Q13905 1077 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 ACAP1Q15027 740 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 PCBP1Q15365 356 aaKnown RBP eCLIP9.37□□□□□ -0.918e-7■■□□□ 13.6
TPM3-213ENST00000368545 FAM187BQ17R55 369 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 KRT39Q6A163 491 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 GDF6Q6KF10 455 aaPredicted RBP9.37□□□□□ -0.91
TPM3-213ENST00000368545 DPY19L2P1Q6NXN4 242 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 ELMSAN1Q6PJG2 1045 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 APBB1IPQ7Z5R6 666 aaPredicted RBP9.37□□□□□ -0.91
TPM3-213ENST00000368545 ZNF410Q86VK4 478 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 PPM1KQ8N3J5 372 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 TXLNBQ8N3L3 684 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 ACSF2Q96CM8 615 aaPredicted RBP9.37□□□□□ -0.91
TPM3-213ENST00000368545 WDR89Q96FK6 387 aaPredicted RBP9.37□□□□□ -0.91
TPM3-213ENST00000368545 EIF3CQ99613 913 aaKnown RBP9.37□□□□□ -0.91
TPM3-213ENST00000368545 CHP1Q99653 195 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 LPIN3Q9BQK8 851 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 FAM213AQ9BRX8 229 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 DESI2Q9BSY9 194 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 MSTO1Q9BUK6 570 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 NRSN2Q9GZP1 204 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 DEF6Q9H4E7 631 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 SIX2Q9NPC8 291 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 ANKFY1Q9P2R3 1169 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 APEX2Q9UBZ4 518 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 SLC6A14Q9UN76 642 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 AKT3Q9Y243 479 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 FHOD1Q9Y613 1164 aa9.37□□□□□ -0.91
TPM3-213ENST00000368545 BZW2Q9Y6E2 419 aaKnown RBP9.37□□□□□ -0.91
TPM3-213ENST00000368545 GBF1Q92538 1859 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 INO80B-WBP1J3KQ70 363 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 EPHX1P07099 455 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 ANXA13P27216 316 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 DLG4P78352 724 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 TAP1Q03518 808 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 PSMD6Q15008 389 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 FSCN1Q16658 493 aaKnown RBP9.36□□□□□ -0.91
TPM3-213ENST00000368545 KIAA0753Q2KHM9 967 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms